{"id":85,"date":"2021-10-08T13:45:37","date_gmt":"2021-10-08T06:45:37","guid":{"rendered":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/?page_id=85"},"modified":"2021-10-08T15:18:22","modified_gmt":"2021-10-08T08:18:22","slug":"timetable","status":"publish","type":"page","link":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/timetable\/","title":{"rendered":"Timetable"},"content":{"rendered":"

<\/p>\n

Saturday, 28 June<\/u><\/strong><\/h2>\n

11.00 \u2013 14.00 Registration at the\u00a0Institute\u00a0of\u00a0Cytology\u00a0and Genetics<\/p>\n

14.00 Opening Ceremony<\/p>\n

14.10 \u2013 15.45\u00a0Lecture 1.<\/u><\/p>\n

Prof. Falk Schreiber, IPK Gatersleben, Germany.<\/em><\/p>\n

Analysis of biological networks and related data.<\/p>\n

16.00 -17.45\u00a0Lecture 2.<\/u><\/p>\n

Prof. Ralf\u00a0Hofest\u00e4dt,\u00a0Bielefeld University,\u00a0Germany.<\/em><\/p>\n

Metabolic network analysis<\/p>\n

18-00 \u2013 19.35\u00a0Seminar<\/u>\u00a01<\/u>.<\/p>\n

Mr. Yury Vyatkin,\u00a0Institute\u00a0of\u00a0Cytology\u00a0and Genetics,\u00a0Novosibirsk,\u00a0Russia.<\/em><\/p>\n

Introduction to HPC.<\/p>\n

Sunday, 29 June<\/u><\/strong><\/h2>\n

9.30 \u2013 11.05\u00a0Lecture 3.<\/u><\/p>\n

Prof. Dmitry\u00a0Scherbakov,\u00a0Limnological\u00a0Institute SB RAS,\u00a0Irkutsk,\u00a0Russia.<\/em><\/p>\n

Discrete models for molecular evolution simulation at the population level.<\/p>\n

11.25-13.00\u00a0Lecture<\/u>\u00a04.<\/u><\/p>\n

Dr. Luciano Milanesi, CNR-Institute for Biomedical Technologies,\u00a0<\/em>Milan<\/em>,\u00a0Italy<\/em><\/p>\n

Bioinformatics applications by using the GRID computing technology.<\/p>\n

Lunch<\/p>\n

15.00 \u2013 16.35\u00a0Lecture 5.<\/u><\/p>\n

Dr. Srinivasan Ramachandran,\u00a0Institute of Genomics and Integrative Biology, Delhi, India<\/em><\/p>\n

Application Bioinformatics for infectious diseases<\/p>\n

17-00 \u2013 18.35\u00a0Seminar 2.<\/u><\/p>\n

Dr. Daniil Naumoff, GosNIIgenetika, Moscow, Russia.<\/em><\/p>\n

Practical course on the protein sequence analysis: searching for homologues and their hierarchical classification<\/p>\n

20-00 \u2013 24-00 Cultural Program. Evening Novosibirsk excursion. Fireworks festival dedicated to Novosibirsk 115th<\/sup>\u00a0annivesary.<\/p>\n

Monday, 30 June<\/u><\/strong><\/h2>\n

9.30 \u2013 11.05\u00a0Lecture 6.<\/u><\/p>\n

Prof. Alexis Ivanov,\u00a0<\/em>V.N.\u00a0Orechovich\u00a0Institute of Biomedical Chemistry RAMS,\u00a0Moscow,\u00a0Russia.<\/em><\/p>\n

Platform \u00abFrom Gene to Lead Compound\u00bb: integration\u00a0in\u00a0silico<\/em>\u00a0and\u00a0in vitro\u00a0<\/em>technologies<\/p>\n

11.25-13.00\u00a0Lecture<\/u>\u00a07.<\/u><\/p>\n

Dr. Olga Krebs, EML Research\u00a0gGmbH, Heidelberg,\u00a0Germany.<\/em><\/p>\n

Integration of reaction kinetics data: and modeling of metabolic networks: SABIO RK and SYCAMORE.<\/p>\n

Lunch<\/p>\n

15.00 \u2013 16.35\u00a0Lecture 8.<\/u><\/p>\n

Dr. Stefan Heinrich,\u00a0EML Research\u00a0gGmbH, Heidelberg, Germany.<\/em><\/p>\n

PIPSA: Comparison of protein interaction properties.<\/p>\n

17-00 \u2013 18.35\u00a0Seminar 3.<\/u><\/p>\n

Dr. Olga Krebs,\u00a0<\/em>Dr. Stefan Heinrich,\u00a0EML Research\u00a0gGmbH, Heidelberg,\u00a0Germany<\/em>.<\/em><\/p>\n

Practical course on SABIO RK and SYCAMORE.<\/p>\n

19-00 Cultural Program. Foolball match between ICG and non-ICG participants dedicated to EURO-2008.<\/p>\n

Thursday, 1 July<\/u><\/strong><\/h2>\n

9.30 \u2013 11.05\u00a0Lecture 9.<\/u><\/p>\n

Prof. Thomas Ludwig,\u00a0Ruprecht-Karls-Universitat,\u00a0Heidelberg,\u00a0Germany<\/em>.<\/em><\/p>\n

Introduction to high-performance computing.\u00a0(1) Architecture of high performance computers<\/p>\n

11.25-13.00\u00a0Lecture<\/u>\u00a010.<\/u><\/p>\n

Prof. Thomas Ludwig,\u00a0Ruprecht-Karls-Universitat,\u00a0Heidelberg,\u00a0Germany<\/em>.<\/em><\/p>\n

Introduction to high-performance computing.\u00a0(2) Parallel programming principles<\/p>\n

Lunch<\/p>\n

15.00 Young scientists presentations.<\/u><\/strong><\/p>\n

Wednesday, 2 July<\/u><\/strong><\/h2>\n

9.30 \u2013 11.05\u00a0Lecture 11.<\/u><\/p>\n

Prof. Thomas Ludwig,\u00a0Ruprecht-Karls-Universitat,\u00a0Heidelberg,\u00a0Germany<\/em>.<\/em><\/p>\n

Introduction to high-performance computing.\u00a0(3) Message passing with MPI<\/p>\n

11.25-13.00\u00a0Lecture<\/u>\u00a012.<\/u><\/p>\n

Prof. Thomas Ludwig,\u00a0Ruprecht-Karls-Universitat,\u00a0Heidelberg,\u00a0Germany<\/em>.<\/em><\/p>\n

Introduction to high-performance computing.\u00a0(4) Advanced issues with message passing<\/p>\n

Lunch<\/p>\n

15.00 \u2013 16.35\u00a0Lecture 13.<\/u><\/p>\n

Dr. Alexandros Stamatakis, Ludwig-Maximilians-University, Munich, Germany<\/em><\/p>\n

Models, Algorithms, and Parallel Computing for Large-Scale\u00a0Phylogenetic\u00a0Inference<\/p>\n

17-00 Closing Ceremony<\/p>\n

Young Scientists presentation program.<\/u><\/strong><\/h2>\n

Oral presentations. (Time for presentation: 15 min + 5 min for questions)<\/strong><\/p>\n

    \n
  1. Anischenko<\/em>,Belarusian\u00a0State\u00a0University,\u00a0Minsk,\u00a0Belarus. HIV-1 gp120 v3-loop comparative structure analysis: search for the structurally conserved regions.<\/li>\n
  2. Chaplygina<\/em>, Institute of Applied and Fundamental Medicine,Nizhny Novgorod\u00a0State\u00a0Medical\u00a0Academy,\u00a0Nizhny Novgorod,\u00a0Russia.\u00a0Phylogenetic\u00a0classification\u00a0\u00a0of\u00a0the HECT-domain\u00a0ubiquitin-protein\u00a0ligase\u00a0family<\/li>\n
  3. Eltsov<\/em>, Institute of cytology and genetics SB RAS,Novosibirsk,Russia. The new algorithm for\u00a0phylogenetic\u00a0reconstruction of non-recombining DNA sequences.<\/li>\n
  4. Fazalova<\/em>, Limnological Institute SB RAS, Irkutsk, Russia.To be announced.<\/li>\n<\/ol>\n

    Yu.<\/em>\u00a0Grushetsky, United\u00a0Institute\u00a0of\u00a0Informatics\u00a0Problems of NASB,\u00a0Minsk,\u00a0Belarus.<\/em>\u00a0Prediction of protein interactions using homologous interfaces.<\/p>\n

      \n
    1. Kulakovskiy<\/em>,Engelhardt\u00a0Institute of Molecular Biology RAS,\u00a0Mocsow,\u00a0Russia.\u00a0Incorporating different types of experimental data on DNA-protein binding into the single\u00a0in\u00a0silico<\/em>\u00a0model.<\/li>\n<\/ol>\n

      Yu.<\/em>\u00a0Medvedeva<\/em>,\u00a0GosNIIgenetika,\u00a0Moscow,\u00a0Russia.\u00a0Reduced level of synonymous substitution in\u00a0CpG\u00a0containing\u00a0codons\u00a0suggests functional role of\u00a0intragenic\u00a0and 3\u2019\u00a0CpG\u00a0islands in human genes.<\/p>\n

        \n
      1. Nyporko<\/em>,Instituteof\u00a0Cell\u00a0Biology and Genetic Engineering of NAS of\u00a0Ukraine,\u00a0Kiev,\u00a0Ukraine. Influence of amino acid replacements associated with multidrug resistance on beta-tubulin\u00a0molecular dynamics.<\/li>\n<\/ol>\n

        Poster presentations<\/strong><\/p>\n

          \n
        1. Kovalyov<\/em>, Institute of Applied and Fundamental Medicine,Nizhny NovgorodState\u00a0Medical\u00a0Academy,\u00a0Nizhny Novgorod,\u00a0Russia. UBIQUITOMIX database: a new resource on\u00a0ubiquitin\u00a0system.<\/li>\n
        2. Prakhov<\/em>,University\u00a0of\u00a0Nizhni\u00a0Novgorod,\u00a0Nizhni\u00a0Novgorod,\u00a0Russia.\u00a0Validation of viral EBNA1 protein as the perspective target for drug discovery.<\/li>\n<\/ol>\n

          <\/p>","protected":false},"excerpt":{"rendered":"

          Saturday, 28 June 11.00 \u2013 14.00 Registration at the\u00a0Institute\u00a0of\u00a0Cytology\u00a0and Genetics 14.00 Opening Ceremony 14.10 \u2013 15.45\u00a0Lecture 1. Prof. Falk Schreiber, IPK Gatersleben, Germany. Analysis of biological networks and related data. 16.00 -17.45\u00a0Lecture 2. Prof. Ralf\u00a0Hofest\u00e4dt,\u00a0Bielefeld University,\u00a0Germany. Metabolic network analysis 18-00 … Continue reading →<\/span><\/a><\/p>\n","protected":false},"author":13,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/pages\/85"}],"collection":[{"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/users\/13"}],"replies":[{"embeddable":true,"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/comments?post=85"}],"version-history":[{"count":3,"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/pages\/85\/revisions"}],"predecessor-version":[{"id":131,"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/pages\/85\/revisions\/131"}],"wp:attachment":[{"href":"https:\/\/conf.icgbio.ru\/bgrs-school-2008\/en\/wp-json\/wp\/v2\/media?parent=85"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}