Preliminary program of the seminar

June 18, 2010
Institute of Cytology and Genetics SB RAS, Conference Hall


Time Speakers Tentative title

9:30 – 9:35 Prof. Nikolay Kolchanov (IC&G), Prof. Guy Riba (INRA) Opening ceremony. Meeting foreword: Perspectives of the Russian-French Co-operation in Genomics, Bioinformatics and Life Sciences Modeling

9:35 – 10:05 Dr. Jean-François Gibrat The Microbiogenomics warehouse: extraction and integration of relevant information from heterogeneous data provided by genomic comparisons

10:05 – 10:35 Prof. Nikolay Kolchanov The systems biology: integration of experimental and computational approaches

10:35– 10:50 TEA BREAK

10:50 – 11:20 Dr. Elena Salina The large – scale organization of the subtelomeric chromosome regions of common wheat

11:20 – 11:50 Dr. Alexander Bolotine Next generation sequencing

11:50 – 12:20 Dr. Vsevolod Makeev Homology-based assembly and annotation of genomes of species with biotechnological value

12:20 – 14:30 LUNCH

14:30 – 15:00 Dr. Thomas Faraut Contribution of comparative genomics to the mapping and the assembly of genomes

15:00 – 15:30. Dr. Alex Kochetov Computational genomics: searching for new proteome components
15:30 – 16:00. François Rodolphe Likelihood free techniques applied to protein 3D structure prediction

16:00 – 16:15 TEA BREAK

16:15 – 16:45 Dr. Sergey Lashin Computer modeling of prokaryotic communities evolution

16:45 – 17:15 Dr. Alain Trubuil Image analysis and modeling at the cellular and tissue scales

17:15 – 17:45 Dr. Dmitry Afonnikov Analysis of the leaf hairiness morphology in wheat: computational approaches using the image processing technique

June 19, 2010
Institute of Cytology and Genetics SB RAS, Conference Hall


Time Speakers Tentative title

9:30 – 10:00 Prof. Andrey Lisitsa Knowledge-based algorithm for integration of the “omics” data

10:00 – 10:30 Dr. Nicolas Turenne Large Screening of Gene Interactions from Medline covering all Bovine Embryo Genes

10:30 – 11:00 Dr. Vladimir Ivanisenko Reconstruction of molecular genetic networks: text mining as a tool for knowledge discovery

11:00– 11:15 TEA BREAK

11:15 – 11:45 Prof. Mikhail Moshkin Animal genetics: fundamental and applied research

11:45 – 12:15 Prof. Maria Samsonova Variation and canalization of gene expression in the Drosophila blastoderm


12:15 – 14:30 LUNCH

14:30 – 15:00 Dr. Dmitry Oschepkov Detection of relation between presence of regulatory signals in promoters of genes and their differential expression

15:00 – 15:30. Dr. Vitaly Likhoshvai The genetic networks theory

16:00 – 16:15 TEA BREAK

16:15 – 16:45 Dr. Alexis Peaucelle, Dr. Jan Traas From gene function to morphogenesis at the shoot apical meristem

16:45 – 17:15 Dr. Viktorya Mironova The mathematical model for investigation of auxin-regulated root patterning in wild type and under treatments


June 20, 2010
Match meetings, discussion of the directions of joint research and future collaboration within French-Russian and EC frameworks. Round table discussion “Perspectives of the Russian-French Co-operation in Genomics, Bioinformatics and Life Sciences Modeling”.

June 21, 2010
Visits to the Institute of Cytology and Genetics SB RAS laboratories. SB RAS Exhibition Centre and Akademgorodok excursions.