October 12, 2008
Opening session
16.00 Welcome remarks, workshop program announcement. Prof. Nikolay Kolchanov, Dr. Srinivasan Ramachandran
16.15 “Bioinformatics at the Institute of Cytology and Genetics”. A documentary movie. 16.30 Invited talk. The systems approach to anti-tuberculosis medicine. Prof. Vadim Govorun, Research Institute of the Physico-Chemical Medicine of the Ministry of the Health protection and Social Development
17.30 Invited talk. Modeling of the tuberculosis spreading and analysis of factors influencing on the epidemic process. Prof. Alexey Romanyukha, Institute of Numerical mathematics RAS, Moscow October 13, 2008
(45 min for talk+5min for questions=50 min per speaker)
| Time | Speakers and Chair | Tentative title |
| 9:30 A.M. – 10:20 A.M. | Dr. S. Ramachandran, Institute of Genomics and Integrative Biology, Delhi | The Mycobacterium tuberculosis SysBorg |
| 10:20 A.M. – 11: 10 A.M. | Prof. Manju Bansal, Molecular Biophysics Unit, Indian Institute of Science, Bangalore | Prediction of Promoters |
| 11: 10 A.M. – 11.30 A.M. | TEA BREAK | |
| 11:30 A.M. – 12:20 P.M. | Dr. Vsevolod Makeev, State Research Center GosNIIGenetika, Moscow | Analysis of bacterial genomic sequences |
| 12:20 P.M. – 1:10 P.M. | Dr. Vinod Scaria, Institute of Genomics and Integrative Biology, Delhi | Molecular Players in Host-Pathogen Interaction: Roles for noncoding RNAs |
| 1:10 P.M. – 2:15 P.M. | LUNCH BREAK | |
| 2:15 P.M. – 3:05 P.M. | Dr. Debasisa Mohanty, National Institute of Immunology, New Delhi | In silico identification of novel biosynthetic pathways by genome analysis |
| 3:05 P.M. – 3:55 P.M. | Dr. Vitaly Likhoshvai, Institute of Cytology and Genetics SB RAS, Novosibirsk | Mathematical modeling and computer analysis of gene networks |
| 3:55 P.M. – 4:15 P.M. | TEA BREAK | |
| 4:15 P.M. – 5:05 P.M. | Dr. N. Srinivasan, Molecular Biophysics Unit, Indian Institute of Science, Bangalore | Bioinformatics approach to detect protein-protein interactions |
| 5:05 P.M. – 5:55 P.M. | Dr. Vladimir Ivanisenko, Institute of Cytology and Genetics SB RAS, Novosibirsk | Drug targets discovery with text-mining and bioinformatics approaches: ANDCell and PDBSiteScan tools |
October 14, 2008
| Time | Speakers and Chair | Tentative title |
| 9:30 A.M. – 10:20 A.M. | Dr. Bhupesh Taneja, Institute of Genomics and Integrative Biology, Delhi | New Approaches to identifying drug targets using an integrative approach |
| 10:20 A.M. – 11: 10 A.M. | Prof. Alexander Veselovsky, Institute of Biomedical Chemistry RAMS, Moscow | Selection of new target proteins for drug design in genome of Mycobacterium tuberculosis |
| 11: 10 A.M. – 11.30 A.M. | TEA BREAK | |
| 11:30 A.M. – 12:20 P.M. | Dr. G.P.S. Raghava, Institute for Microbial Technology (CSIR), Chandigarh | Prediction algorithms for specificity and cross-rectivity of Kinase inhibitors |
| 12:20 P.M. – 1:10 P.M. | Dr. Alexey Rudko, Research Institute of Medical Genetics of Tomsk Scientific Center of Russian Academy of Medical Sciences, Tomsk, Russia | Genetic aspects of the tuberculosis susceptibility in Siberian populations |
| 1:10 P.M. – 2:15 P.M. | LUNCH BREAK | |
| 2:15 P.M. – 3:05 P.M. | Dr. Nikolay Pertsev, Omsk Branch of the Sobolev Institute of Mathematics SB RAS | Stochastic individual-based model of spreading of tuberculosis. |
| 3:05 P.M. – 3:55 P.M. | Dr. Sergey Tat’kov, Institute of Cytology and Genetics SB RAS, Novosibirsk | The role of the Beijing family of M.tuberculosis in the spread of multidrug-resistant tuberculosis in Novosibirsk region of West Siberia |
| 3:55 P.M. – 4:15 P.M. | TEA BREAK | |
| 4:15 P.M. – 5:05 P.M. | Prof. Valentin Topchii, Omsk Branch of the Sobolev Institute of Mathematics | Populations cutting at high level. Extinction time and time of supplanting all particles by particles of one type. |
| 5:05 P.M. – 5:55 P.M. | Round Table discussion |