A B C D E F G H I J K L M N O P R S T U V W Y Z

A

• AFONNIKOV D.
  • FUNCTIONAL RELATIONSHIP BETWEEN AMINO ACID RESIDUES AT N- AND C-TERMINI OF DNA-BINDING REGIONS OF TRANSCRIPTION FACTORS CREB AND AP-1 REVEALED BY ANALYZING THE PAIR CORRELATIONS OF AMINO ACID SUBSTITUTIONS.
    AFONNIKOV D., TITOV I.I.
  • STATISTICAL RELATION BETWEEN THE POSITIONS OF THE ALPHA-HELIX IN THE ZINC-FINGER DNA-BINDING DOMAIN: RESULTS FROM THE PHAGE DISPLAY DATA ANALYSIS.
    AFONNIKOV D., WINGENDER E.
  • THE PRACTICAL STUDY OF THE BEHAVIOR OF THE COMPLEX DYNAMIC SYSTEMS ON THE BASIS OF THE LIFE GAME FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    AFONNIKOV D., KOLESOV G.B., MININA A.V., MIKHAILOV Yu.I., IVASHIN S.A.
• AKBEROVA N.
  • CONTEXT-FREE METHOD OF PATTERN RECOGNITION IN THE GENETIC TEXTS.
    AKBEROVA N., KOLPAKOV A., LEONTIEV A.
• ALEXANDROV N.
  • ON THE NUMBER OF STRUCTURAL FAMILIES IN THE PROTEIN UNIVERSE.
    ALEXANDROV N., GO N.
• ALIEV J.A.
  • SOME POSSIBLE ELEMENTS OF TRANSCRIPTION REGULATION OF RICE CHLOROPLAST ENCODED GENES.
    SHAHMURADOV I.A., MUSTAFAYEV N.Sh., ALIEV J.A. 
• ALVAREZ-BUYLLA ELENA
  • FLOWER MORPHOGENESIS IN ARABIDOPSIS THALIANA: A LOGICAL ANALYSIS.
    MENDOZA LUIS, ALVAREZ-BUYLLA ELENA, THIEFFRY DENIS
• AMIKISHIEV V.G.
  • ANALYSIS OF FUNCTIONAL SITE MOTIFS OF MOBILE GENETIC ELEMENTS RELATIVE TO THEIR POSSIBLE MOLECULAR FUNCTIONS.
    AMIKISHIEV V.G., RATNER V.A.
• ANANKO E.A.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • PROGRAMS FOR DATA INPUT TO THE TRANSCRIPTION REGULATORY REGIONS DATABASE.
    ANANKO E.A., NAUMOCHKIN A.N., FOKIN O.N., FROLOV A.S.
  • INTERFERON-INDUCIBLE GENES – TRANSCRIPTION REGULATORY REGIONS DATABASE (IIG-TRRD).
    ANANKO E.A., BAZHAN S.I., BELOVA O.E.
  • PLANT-TRRD DATABASE.
    GORYACHKOVSKY T.N., ANANKO E.A., PELTEK S.E.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • GENE NETWORKS: A DATABASE AND ITS AUTOMATED VISUALIZATION THROUGH THE INTERNET IN THE GENENET COMPUTING SYSTEM.
    ANANKO E.A., KOLPAKOV F.A., KOLESOV G.B., KOLCHANOV N.A.
• ARKHIPOVA IRINA R.
  • SPECIFIC FEATURES OF X-LINKED PROMOTER SEQUENCES IN DROSOPHILA.
    ARKHIPOVA IRINA R.
  • A PROGRAM FOR CALCULATING GAPPED DINUCLEOTIDE CORRELATIONS IN NUCLEIC ACID SEQUENCES AND ITS APPLICATION TO REVEAL SPECIFIC SEQUENCE FEATURES OF X-LINKED PROMOTERS IN DROSOPHILA.
    ARKHIPOVA IRINA R., POKROVSKI SERGEI V.
• ARRIGO P.
  • SELF-ORGANIZING NEURAL NETWORKS HIGHLIGHT POSSIBLE FUNCTIONALLY RELEVANT REGIONS IN THE C-DNA CODING SEQUENCES OF G-PROTEIN COUPLED RECEPTORS.
    CASADIO R., ARRIGO P., FARISELLI P.
• ARSHINOVA T.V.
  • STRUCTURE-FUNCTIONAL HOMOLOGY OF THE PROKARYOTIC AND EUKARYOTIC RNA POLYMERASES.
    SAVINKOVA L.K., SOKOLENKO A.A., SEDOVA V.M., RAU V.A., TULOKHONOV I.I, KOBZEV V.F., ARSHINOVA T.V.
• ARZIEV A.Sh.
  • THE LEUCINE MOTIF IN SUBUNITS 6 AND 9 OF PLANT MITOCHONDRIAL ATP SYNTHASE PROVIDING PRESUMABLY THE ASSEMBLY OF THE MEMBRANE PART OF THE ENZYME.
    KONSTANTINOV Yu.M., ARZIEV A.Sh., PODSOSONNY V.A.
• ASTAKHOVA T.V.
  • SOME PROBLEMS OF GENE RECOGNITION IN PROTIST DNA.
    ASTAKHOVA T.V., GELFAND M.S., ROYTBERG M.A.
• AULCHENKO Yu.S.
  • THE EFFICIENCY OF AN APPROXIMATION OF THE LIKELIHOOD BY CUTTING: DEPENDANCE ON A SIZE OF LOOPS IN A PEDIGREE.
    AULCHENKO Yu.S., AXENOVICH T.I.
• AXENOVICH T.I.
  • THE EFFICIENCY OF AN APPROXIMATION OF THE LIKELIHOOD BY CUTTING: DEPENDANCE ON A SIZE OF LOOPS IN A PEDIGREE.
    AULCHENKO Yu.S., AXENOVICH T.I.

B

• BABENKO V.N.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • PROMOTERS: AT/GC CONTENT AND PROPERTIES OF TATA BOX.
    KOSAREV P., BABENKO V.N.
  • COMBINATORIAL IDENTIFICATION OF PROMOTERS INDUCED UPON IMMUNE CELL ACTIVATION.
    KEL A.E., KEL-MARGOULIS O.V., BABENKO V.N., WINGENDER E.
  • SEARCH FOR DEGENERATE OLIGONUCLEOTIDE MOTIFS IN TRANSCRIPTION FACTOR BINDING SITES AND EUKARYOTIC PROMOTERS (THE SYSTEM ARGO).
    VISHNEVSKY O.V., PODKOLODNAYA O.A., BABENKO V.N.
  • STRUCTURAL AND COMPOSITIONAL FEATURES OF 5’ UNTRANSLATED REGIONS OF HIGHER PLANT MRNAS.
    KOCHETOV A.V., PILUGIN M.V., KOLPAKOV F.A., BABENKO V.N., KVASHNINA E.V., SHUMNY V.K.
  • MGL: AN OBJECT-ORIENTED COMPUTER SYSTEM FOR MOLECULAR GENETIC DATA MANAGEMENT, ANALYSIS, AND VISUALIZATION.
    KOLPAKOV F.A., BABENKO V.N.
• BAJIC I.V.
  • A NEW METHOD OF SPECTRAL ANALYSIS OF DNA/RNA AND PROTEIN SEQUENCES.
    BAJIC V.B., BAJIC I.V., HIDE W.
• BAJIC V.B.
  • A NEW METHOD OF SPECTRAL ANALYSIS OF DNA/RNA AND PROTEIN SEQUENCES.
    BAJIC V.B., BAJIC I.V., HIDE W.
    
• BALDI PIERRE
  • DNA STRUCTURE IN HUMAN RNA POLYMERASE II PROMOTERS.
    PEDERSEN ANDERS GORM, BALDI PIERRE, CHAUVIN YVES, BRUNAK SOREN
• BANSAL A.K.
  • CONSERVED RNA STRUCTURES REGULATE INITIATION OF TRANLSATION OF ESCERICHIA COLI AND HAEMOPHILUS INFLUENZAE RIBOSOMAL PROTEIN OPERONS.
    VITRESCHAK A., BANSAL A.K., GELFAND M.S.
• BATURIN V.
  • PROTEIN 3D ALIGNMENT SOFTWARE FOR INTEL COMPUTERS.
    VTYURIN N., BATURIN V., GULIN V., GORYACHEV N.
• BAZHAN S.I.
  • INTERFERON-INDUCIBLE GENES – TRANSCRIPTION REGULATORY REGIONS DATABASE (IIG-TRRD).
    ANANKO E.A., BAZHAN S.I., BELOVA O.E.
    
  • INTEGRATING OF KNOWLEDGE ON REGULATION OF MX1 PROTEIN INDUCTION AND ANTIVIRAL ACTION BY A MATHEMATICAL MODELING APPROACH.
    BAZHAN S.I., BELOVA O.E.
• BELOVA O.E.
  • INTERFERON-INDUCIBLE GENES – TRANSCRIPTION REGULATORY REGIONS DATABASE (IIG-TRRD).
    ANANKO E.A., BAZHAN S.I., BELOVA O.E.
    
  • INTEGRATING OF KNOWLEDGE ON REGULATION OF MX1 PROTEIN INDUCTION AND ANTIVIRAL ACTION BY A MATHEMATICAL MODELING APPROACH.
    BAZHAN S.I., BELOVA O.E.
• BENTOLILA SIMONE
  • MODELING SIGNAL PATHWAYS.
    BENTOLILA SIMONE
• BEREZIKOV E.
  • TOWARDS UNDERSTANDING OF REGULATION OF NON-LTR RETROTRANSPOSONS: RTE-1 ELEMENT OF THE NEMATODE CAENORHABDITIS ELEGANS.
    BEREZIKOV E., BLINOV A., BERGTROM G.
• BERGTROM G.
  • TOWARDS UNDERSTANDING OF REGULATION OF NON-LTR RETROTRANSPOSONS: RTE-1 ELEMENT OF THE NEMATODE CAENORHABDITIS ELEGANS.
    BEREZIKOV E., BLINOV A., BERGTROM G.
• BERIKOV V.B.
  • REGRESSION ANALYSIS OF MUTATIONAL SPECTRA.
    ROGOZIN I.B., BERIKOV V.B.
• BISHOP M.J.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
  • THEATRE: A NOVEL TOOL FOR THE COMPARATIVE INVESTIGATION AND DISPLAY OF EVOLUTIONARY DIVERSITY OF FUNCTIONAL AND STRUCTURAL FEATURES IN DNA SEQUENCES.
    EDWARDS Y.J.K., FRITH M., ELGAR G., BISHOP M.J.
• BLINOV A.
  • TOWARDS UNDERSTANDING OF REGULATION OF NON-LTR RETROTRANSPOSONS: RTE-1 ELEMENT OF THE NEMATODE CAENORHABDITIS ELEGANS.
    BEREZIKOV E., BLINOV A., BERGTROM G.
• BLINOV V.M.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
  • INVARIANT SECONDARY STRUCTURE OF ALU REPEATS PREDETERMINES CLUSTERIZATION OF REGULATORY ELEMENTS IN HUMAN GENOME.
    BLINOV V.M., UVAROV D.L., RESENCHUK S.M., CHIRIKOVA G.B., KISSELEV L.L.
• BOGACHEV S.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
• BORK PEER
  • STRUCTURAL AND FUNCTIONAL ANNOTATION OF GENOMIC SEQUENCES:ASSIGNMENT OF FOLD FAMILY AND SORTING OF PROTEINS WITH RESPECT TO SUBCELLULAR LOCALIZATION.
    EISENHABER FRANK, BORK PEER, HUYNEN MARTIJN, ORENGO CHRISTINE, SCHULTZ JORG, SUNYAEV SHAMIL R., YUAN YANPING
• BOURNE P.
  • LIKENESS: A SYSTEM SEARCHING FOR AND ALIGNING SIMILAR PROTEIN CONFORMATIONS.
    PONOMARENKO M.P., KOLCHANOV N.A., SHINDYALOV I., BOURNE P.
• BRUNAK SOREN
  • DNA STRUCTURE IN HUMAN RNA POLYMERASE II PROMOTERS.
    PEDERSEN ANDERS GORM, BALDI PIERRE, CHAUVIN YVES, BRUNAK SOREN
    
• BRUNK B.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
• BUCHER PHILIPP
  • A MODULAR METAPROFILE-BASED SYSTEM FOR PREDICTION AND ANALYSIS OF EUKARYOTIC PROMOTERS.
    JUNIER THOMAS, KROGH ANDERS, BUCHER PHILIPP
• BUGAENKO N.N.
  • MINIMUM ENTROPY PRINCIPLE AND CLASSIFICATION OF SYMBOLS FOR REVEALING STATISTICAL REGULARITIES IN A TEXT.
    BUGAENKO N.N., GORBAN A.N., SAPOZHNIKOV A.N.
  • MAXIMUM ENTROPY PRINCIPLE AND MEASUREMENT OF INFORMATION CONTENT OF GENETIC TEXT.
    BUGAENKO N.N., GORBAN A.N., SADOVSKY M.G.
• BUGREEV D.V.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
  • INTERPRETATION OF X-RAY ANALYSIS DATA OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE ENZYME.
    BUGREEV D.V., VASYUTINA E.L., BUNEVA V.N., NEVINSKY G.A.
• BUNEVA V.N.
  • INTERPRETATION OF X-RAY ANALYSIS DATA OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE ENZYME.
    BUGREEV D.V., VASYUTINA E.L., BUNEVA V.N., NEVINSKY G.A.
    
  • LACTOFERRIN IS A NEW TRANSCRIPTIONAL FACTOR HAVING MANY DIFFERENT UNIQUE BIOLOGICAL FUNCTIONS.
    KANYSHKOVA T.G., SEMENOV D.V., BUNEVA V.N., NEVINSKY G.A.

C

• CASADIO R.
  • SELF-ORGANIZING NEURAL NETWORKS HIGHLIGHT POSSIBLE FUNCTIONALLY RELEVANT REGIONS IN THE C-DNA CODING SEQUENCES OF G-PROTEIN COUPLED RECEPTORS.
    CASADIO R., ARRIGO P., FARISELLI P.
• CHALEY M.B.
  • A PROBABLE MUTUAL RELATIONSHIP BETWEEN LATENT PERIODIC GENE STRUCTURE AND PERIODIC CONFORMATION OF THE PROTEIN.
    CHALEY M.B., KOROTKOV E.V.
• CHAUME DENYS
  • IMGT ALGORITHM AND RULES FOR IMMUNOGLOBULIN AND T-CELL RECEPTOR MOTIF RECOGNITION.
    GIUDICELLI VERONIQUE, CHAUME DENYS, MENNESSIER GERARD, LEFRANC MARIE-PAULE
• CHAUVIN YVES
  • DNA STRUCTURE IN HUMAN RNA POLYMERASE II PROMOTERS.
    PEDERSEN ANDERS GORM, BALDI PIERRE, CHAUVIN YVES, BRUNAK SOREN
    
• CHEKMENEV D.S.
  • PRE-MRNA SPLICING IN EUKARYOTES – INTRON STRUCTURE, INTRON DETECTION, ALGORITHMS AND DATA STRUCTURES.
    CHEKMENEV D.S.
• CHEREPANOVA E.Yu.
  • GENETIC LEVEL OF BIOPROCESSES REGULATION AND BIOSYSTEMS IN EXTREME CONDITIONS.
    NEFEDOV V.P., CHEREPANOVA E.Yu.
• CHIKISHEVA T.A.
  • RECONSTRUCTION OF THE GENOFOND PECULIARITIES OF THE ANCIENT PAZYRYK POPULATION (I-II MILLENIUM BC) FROM GORNY ALTAI ACCORDING TO THE MTDNA STRUCTURE.
    VOEVODA M.I., SITNIKOVA V.V., ROMASHCHENKO A.G., CHIKISHEVA T.A., POLOS’MAK N.V., MOLODIN V.I.
• CHIRIKOVA G.B.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
  • INVARIANT SECONDARY STRUCTURE OF ALU REPEATS PREDETERMINES CLUSTERIZATION OF REGULATORY ELEMENTS IN HUMAN GENOME.
    BLINOV V.M., UVAROV D.L., RESENCHUK S.M., CHIRIKOVA G.B., KISSELEV L.L.
• CLARK M.S.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
• CLYDE A. HUTCHISON
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
• COLLADO-VIDES J.
  • ANALYSIS OF TRANSCRIPTIONAL FACTORS IN E. COLI.
    PEREZ-RUEDA E., VAN HELDEN J., WODAK S., COLLADO-VIDES J.

D

• DAPHNA STRAUSS
  • EXTRACTING KOZAK CONSENSUS SEQUENCE USING KLEISLI.
    JING CHEN, NAM-HAI CHUA, DAPHNA STRAUSS, LIMSOON WONG
• DZHELYADIN T.R.
  • MOLECULAR MECHANISMS OF PROMOTER-POLYMERASE RECOGNITION. ELECTROSTATIC INTERACTIONS IN PROMOTERS RECOGNIZED BY E.COLI Esigma70.
    KAMZOLOVA S.G., DZHELYADIN T.R., SOROKIN A.A., IVANOVA N.N., KUTUZOVA G.I., ESIPOVA N.G., POLOZOV R.V.
• D’ANGELO D.
  • WEBGENE: INTERACTIVE TOOLS FOR PREDICTION AND ANALYSIS OF PROTEIN-CODING GENES STRUCTURE IN INTERNET.
    MILANESI L., ROGOZIN I.B., D’ANGELO D.

E

• EDWARDS Y.J.K.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
  • THEATRE: A NOVEL TOOL FOR THE COMPARATIVE INVESTIGATION AND DISPLAY OF EVOLUTIONARY DIVERSITY OF FUNCTIONAL AND STRUCTURAL FEATURES IN DNA SEQUENCES.
    EDWARDS Y.J.K., FRITH M., ELGAR G., BISHOP M.J.
    
• EISENHABER BIRGIT
  • THE SEQUENCE PATTERN FOR THE GLYCOSYLPHOSPHATIDYL-ANCHOR POSTTRANSLATIONAL MODIFICATION AND ITS RECOGNITION IN PROPROTEIN SEQUENCES.
    EISENHABER BIRGIT
• EISENHABER FRANK
  • STRUCTURAL AND FUNCTIONAL ANNOTATION OF GENOMIC SEQUENCES:ASSIGNMENT OF FOLD FAMILY AND SORTING OF PROTEINS WITH RESPECT TO SUBCELLULAR LOCALIZATION.
    EISENHABER FRANK, BORK PEER, HUYNEN MARTIJN, ORENGO CHRISTINE, SCHULTZ JORG, SUNYAEV SHAMIL R., YUAN YANPING
• ELGAR G.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
  • THEATRE: A NOVEL TOOL FOR THE COMPARATIVE INVESTIGATION AND DISPLAY OF EVOLUTIONARY DIVERSITY OF FUNCTIONAL AND STRUCTURAL FEATURES IN DNA SEQUENCES.
    EDWARDS Y.J.K., FRITH M., ELGAR G., BISHOP M.J.
    
• ELISAPHENKO E.A.
  • THREE SUBFAMILIES OF SHORT INTERSPERSED ELEMENTS OF THE DOG GENOME: POSSIBLE ORIGIN AND FUNCTIONS.
    KOLESNIKOV N.N., ROGOZIN I.B., LAVRENTIEVA M.V., ELISAPHENKO E.A.
• ESIPOVA N.G.
  • MOLECULAR MECHANISMS OF PROMOTER-POLYMERASE RECOGNITION. ELECTROSTATIC INTERACTIONS IN PROMOTERS RECOGNIZED BY E.COLI Esigma70.
    KAMZOLOVA S.G., DZHELYADIN T.R., SOROKIN A.A., IVANOVA N.N., KUTUZOVA G.I., ESIPOVA N.G., POLOZOV R.V.

F

• FALSHINA I.V.
  • THE SEQUENCING AND MOLECULAR ANALYSIS OF COXI GENE FRAGMENTS OF WILD PERENNIAL CROP ELYMUS SIBIRICUS L..
    FALSHINA I.V., VERBITSKII D.S., ROGOZIN I.B., KONSTANTINOV Yu.M., TAUSON E.L.
• FARISELLI P.
  • SELF-ORGANIZING NEURAL NETWORKS HIGHLIGHT POSSIBLE FUNCTIONALLY RELEVANT REGIONS IN THE C-DNA CODING SEQUENCES OF G-PROTEIN COUPLED RECEPTORS.
    CASADIO R., ARRIGO P., FARISELLI P.
• FISHER P.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
• FOKIN O.N.
  • PROGRAMS FOR DATA INPUT TO THE TRANSCRIPTION REGULATORY REGIONS DATABASE.
    ANANKO E.A., NAUMOCHKIN A.N., FOKIN O.N., FROLOV A.S.
• FREIER A.
  • MOLECULAR DATABASE INTEGRATION: ANALYSIS OF METABOLIC NETWORK CONTROL.
    FREIER A., HODING M., HOFESTADT R., LANGE M, SCHOLZ U.
• FRISCH M.
  • COMPEL: A DATABASE ON COMPOSITE REGULATORY ELEMENTS.
    KEL-MARGOULIS O.V., KEL A.E., FRISCH M., ROMASHCHENKO A.G., KOLCHANOV N.A., WINGENDER E.
• FRITH M.
  • THEATRE: A NOVEL TOOL FOR THE COMPARATIVE INVESTIGATION AND DISPLAY OF EVOLUTIONARY DIVERSITY OF FUNCTIONAL AND STRUCTURAL FEATURES IN DNA SEQUENCES.
    EDWARDS Y.J.K., FRITH M., ELGAR G., BISHOP M.J.
    
• FROLOV A.S.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • PROGRAMS FOR DATA INPUT TO THE TRANSCRIPTION REGULATORY REGIONS DATABASE.
    ANANKO E.A., NAUMOCHKIN A.N., FOKIN O.N., FROLOV A.S.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • REGULATION MECHANISMS IN BIOLOGICAL SYSTEMS.
    KOLCHANOV N.A., MATUSHKIN Yu.G., FROLOV A.S.
  • A SYSTEM FOR ACTIVATION OF THE TRRD DATABASE: FURTHER DEVELOPMENT OF GENEEXPRESS.
    FROLOV A.S., LAVRYUSHEV S.V., VOROBIEV D.G., GRIGOROVICH D.A.
  • RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.
  • EUKARYOTIC MRNAS ENCODING ABUNDANT AND SCARCE PROTEINS ARE DISSIMILAR IN MANY STRUCTURAL FEATURES OF 5’-UNTRANSLATED LEADERS.
    KOCHETOV A.V., PONOMARENKO M.P., VOROBIEV D.G., FROLOV A.S., KISSELEV L.L., KOLCHANOV N.A.
  • MGL-PROT: THE ANTHOLOGY-BASED QUERY LANGUAGE FOR THE USER SEARCH FOR THE 3D STRUCTURES AND FUNCTIONS OF PROTEINS IN THE WWW-AVAILABLE DATABASES.
    KOLPAKOV F.A., FROLOV A.S., PONOMARENKO M.P., PODKOLODNY N.L.
  • ANTIGENIC MIMICRY OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 AS A RESULT OF STRUCTURAL SIMILARITY OF PROTEIN GP120 AND HUMAN APOLIPOPROTEIN A-1.
    LUKASHEV V.A., FROLOV A.S., PANIN L.E., GIMAUTDINOVA O.I.
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • BUSINESS GAME EQUILIBRIUM FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., MININA A.V., KONEVA E.I., MIKHAILOV Yu.I., IVASHIN S.A.
  • BUSINESS GAME HUMAN GENOME FOR EDUCATION IN BUSINESS, LAW AND COMMERCE.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., MININA A.V., IVASHIN S.A., MIKHAILOV Yu.I.
• FUMIHIKO MIYOSHI
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• FURMAN D.P.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.

G

• GELFAND M.S.
  • COMPUTER ANALYSIS OF TRANSCRIPTION REGULATORY PATTERNS IN COMPLETELY SEQUENCED BACTERIAL GENOMES.
    GELFAND M.S., MIRONOV A.A.
  • CONSERVED RNA STRUCTURES REGULATE INITIATION OF TRANLSATION OF ESCERICHIA COLI AND HAEMOPHILUS INFLUENZAE RIBOSOMAL PROTEIN OPERONS.
    VITRESCHAK A., BANSAL A.K., GELFAND M.S.
  • SOME PROBLEMS OF GENE RECOGNITION IN PROTIST DNA.
    ASTAKHOVA T.V., GELFAND M.S., ROYTBERG M.A.
  • GENE RECOGNITION USING EST DATA: UNEXPECTEDLY FREQUENT ALTERNATIVE SPLICING OF HUMAN GENES.
    MIRONOV A.A., GELFAND M.S.
  • SEGMENTATION OF YEAST DNA USING HIDDEN MARKOV MODELS.
    PESHKIN L., GELFAND M.S.
• GEORGE L. GABOR MIKLOS
  • FROM GENOMICS TO EPIGENOMICS: DATA TRANSFERABILITY ACROSS THE EVOLUTIONARY SPECTRUM.
    GEORGE L. GABOR MIKLOS
• GIMAUTDINOVA O.I.
  • DISTURBANCES OF GENOM REGULATION AS THE CONSEQUENCE OF THE STRUCTURAL LIKENESS OF HIV-1 ENV PROTEINS AND HUMAN APOLIPOPROTEIN A-I.
    PANIN L.E., LUKASHEV V.A., GIMAUTDINOVA O.I.
  • ANTIGENIC MIMICRY OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 AS A RESULT OF STRUCTURAL SIMILARITY OF PROTEIN GP120 AND HUMAN APOLIPOPROTEIN A-1.
    LUKASHEV V.A., FROLOV A.S., PANIN L.E., GIMAUTDINOVA O.I.
• GIUDICELLI VERONIQUE
  • IMGT ALGORITHM AND RULES FOR IMMUNOGLOBULIN AND T-CELL RECEPTOR MOTIF RECOGNITION.
    GIUDICELLI VERONIQUE, CHAUME DENYS, MENNESSIER GERARD, LEFRANC MARIE-PAULE
• GLAZKO G.V.
  • IN SILICO IDENTIFICATION OF MARS/SARS IN DNA SEQUENCES.
    GLAZKO G.V., ROGOZIN I.B., GLAZKOV M.V.
• GLAZKOV M.V.
  • IN SILICO IDENTIFICATION OF MARS/SARS IN DNA SEQUENCES.
    GLAZKO G.V., ROGOZIN I.B., GLAZKOV M.V.
• GO N.
  • ON THE NUMBER OF STRUCTURAL FAMILIES IN THE PROTEIN UNIVERSE.
    ALEXANDROV N., GO N.
• GORBAN A.N.
  • MINIMUM ENTROPY PRINCIPLE AND CLASSIFICATION OF SYMBOLS FOR REVEALING STATISTICAL REGULARITIES IN A TEXT.
    BUGAENKO N.N., GORBAN A.N., SAPOZHNIKOV A.N.
  • MAXIMUM ENTROPY PRINCIPLE AND MEASUREMENT OF INFORMATION CONTENT OF GENETIC TEXT.
    BUGAENKO N.N., GORBAN A.N., SADOVSKY M.G.
  • AUTHOMATIC CLASSIFICATION OF NUCLEOTIDE SEQUENCES AND ITS RELATION TO NATURAL TAXONOMY AND PROTEIN FUNCTION.
    GORBAN A.N., POPOVA T.G., SADOVSKY M.G.
• GORE M.M.
  • USE OF BIOINFORMATICS IN DEVELOPMENT OF PEPTIDE VACCINE.
    KOLASKAR A.S., URMILA KULKARNI-KALE, GORE M.M.
• GORYACHEV N.
  • PROTEIN 3D ALIGNMENT SOFTWARE FOR INTEL COMPUTERS.
    VTYURIN N., BATURIN V., GULIN V., GORYACHEV N.
• GORYACHKOVSKY T.N.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • PLANT-TRRD DATABASE.
    GORYACHKOVSKY T.N., ANANKO E.A., PELTEK S.E.
• GRIGOROVICH D.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • A SYSTEM FOR ACTIVATION OF THE TRRD DATABASE: FURTHER DEVELOPMENT OF GENEEXPRESS.
    FROLOV A.S., LAVRYUSHEV S.V., VOROBIEV D.G., GRIGOROVICH D.A.
• GRUZDEV A.D.
  • SIGNIFICANT B-DNA CONFORMATIONAL AND PHYSICO-CHEMICAL PROPERTIES OF THE DNA TOPOISOMERASE I SITES.
    PONOMARENKO M.P., VOROBIEV D.G., PONOMARENKO J.V., KUZIN F.E., GRUZDEV A.D., KOLCHANOV N.A.
• GULIN V.
  • PROTEIN 3D ALIGNMENT SOFTWARE FOR INTEL COMPUTERS.
    VTYURIN N., BATURIN V., GULIN V., GORYACHEV N.

H

• HAAS J.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
• HAINEMEIER T.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
• HERTZ GERALD Z.
  • IDENTIFYING DNA AND PROTEIN PATTERNS WITH STATISTICALLY SIGNIFICANT ALIGNMENT MATRICES.
    HERTZ GERALD Z., STORMO GARY D.
• HIDE W.
  • A NEW METHOD OF SPECTRAL ANALYSIS OF DNA/RNA AND PROTEIN SEQUENCES.
    BAJIC V.B., BAJIC I.V., HIDE W.
• HODING M.
  • MOLECULAR DATABASE INTEGRATION: ANALYSIS OF METABOLIC NETWORK CONTROL.
    FREIER A., HODING M., HOFESTADT R., LANGE M, SCHOLZ U.
• HOFESTADT R.
  • MOLECULAR DATABASE INTEGRATION: ANALYSIS OF METABOLIC NETWORK CONTROL.
    FREIER A., HODING M., HOFESTADT R., LANGE M, SCHOLZ U.
• HUYNEN MARTIJN
  • STRUCTURAL AND FUNCTIONAL ANNOTATION OF GENOMIC SEQUENCES:ASSIGNMENT OF FOLD FAMILY AND SORTING OF PROTEINS WITH RESPECT TO SUBCELLULAR LOCALIZATION.
    EISENHABER FRANK, BORK PEER, HUYNEN MARTIJN, ORENGO CHRISTINE, SCHULTZ JORG, SUNYAEV SHAMIL R., YUAN YANPING

I

• IGARASHI TAKAKO
  • A THREE-LAYER MODEL FOR DESCRIBING DEVELOPMENT OF C.ELEGANS.
    TSUGUCHIKA KAMINUMA, IGARASHI TAKAKO, NAKANO TATSUYA, SASAKI SHINYA, MIWA JOHJI
• IGNATIEVA E.V.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • THE LIPID METABOLISM TRANSCRIPTION REGULATORY REGIONS DATABASE (LM-TRRD): TRANSCRIPTION REGULATION OF LIPID METABOLISM GENES.
    IGNATIEVA E.V.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
• ILYICHEV A.A.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• ISHCHENKO I.V.
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • BUSINESS GAME EQUILIBRIUM FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., MININA A.V., KONEVA E.I., MIKHAILOV Yu.I., IVASHIN S.A.
• ISHENKO A.A.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
• IVANISENKO V.A.
  • PREDICTING RNA FOLDING BY GENETIC ALGORITHM WITH LOCAL EXHAUSTION.
    TITOV I.I., IVANISENKO V.A., KOLCHANOV N.A.
• IVANOVA N.N.
  • MOLECULAR MECHANISMS OF PROMOTER-POLYMERASE RECOGNITION. ELECTROSTATIC INTERACTIONS IN PROMOTERS RECOGNIZED BY E.COLI Esigma70.
    KAMZOLOVA S.G., DZHELYADIN T.R., SOROKIN A.A., IVANOVA N.N., KUTUZOVA G.I., ESIPOVA N.G., POLOZOV R.V.
• IVASHIN S.A.
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • BUSINESS GAME EQUILIBRIUM FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., MININA A.V., KONEVA E.I., MIKHAILOV Yu.I., IVASHIN S.A.
  • THE PRACTICAL STUDY OF THE BEHAVIOR OF THE COMPLEX DYNAMIC SYSTEMS ON THE BASIS OF THE LIFE GAME FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    AFONNIKOV D., KOLESOV G.B., MININA A.V., MIKHAILOV Yu.I., IVASHIN S.A.
  • BUSINESS GAME HUMAN GENOME FOR EDUCATION IN BUSINESS, LAW AND COMMERCE.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., MININA A.V., IVASHIN S.A., MIKHAILOV Yu.I.

J

• J. CRAIG VENTER
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• JAKT L.M.
  • LARGE SCALE SCREENING FOR TRANSCRIPTION REGULATORY SEQUENCES RECOGNISED BY HOX HOMEODOMAIN PROTEINS.
    JAKT L.M., SHAM M.H.
• JIAN ZHU
  • A PROMOTER DATABASE OF YEAST SACCHAROMYCES CEREVISIAE (SCPD).
    JIAN ZHU, ZHANG MICHAEL Q.
• JING CHEN
  • EXTRACTING KOZAK CONSENSUS SEQUENCE USING KLEISLI.
    JING CHEN, NAM-HAI CHUA, DAPHNA STRAUSS, LIMSOON WONG
• JUNIER THOMAS
  • A MODULAR METAPROFILE-BASED SYSTEM FOR PREDICTION AND ANALYSIS OF EUKARYOTIC PROMOTERS.
    JUNIER THOMAS, KROGH ANDERS, BUCHER PHILIPP
    

K

• KALEDIN V.I.
  • THE GLUCOCORTICOID-CONTROLLED GENE REGULATORY REGIONS DATABASE (GR-TRRD): THE USING FOR THE ELUCIDATION OF THE MECHANISMS OF CHEMICAL HEPATOCARCINOGENS ACTION.
    MERKULOVA T.I., MERKLOV V.M., KROPATCHEV K.Y., KALEDIN V.I.
• KAMZOLOVA S.G.
  • MOLECULAR MECHANISMS OF PROMOTER-POLYMERASE RECOGNITION. ELECTROSTATIC INTERACTIONS IN PROMOTERS RECOGNIZED BY E.COLI Esigma70.
    KAMZOLOVA S.G., DZHELYADIN T.R., SOROKIN A.A., IVANOVA N.N., KUTUZOVA G.I., ESIPOVA N.G., POLOZOV R.V.
• KANAKO SAITO
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• KANYSHKOVA T.G.
  • LACTOFERRIN IS A NEW TRANSCRIPTIONAL FACTOR HAVING MANY DIFFERENT UNIQUE BIOLOGICAL FUNCTIONS.
    KANYSHKOVA T.G., SEMENOV D.V., BUNEVA V.N., NEVINSKY G.A.
• KARAKIN E.I.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• KATOKHINA L.V.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
• KATSUYUKI YUGI
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• KEL A.E.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • COMPEL: A DATABASE ON COMPOSITE REGULATORY ELEMENTS.
    KEL-MARGOULIS O.V., KEL A.E., FRISCH M., ROMASHCHENKO A.G., KOLCHANOV N.A., WINGENDER E.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • COMBINATORIAL IDENTIFICATION OF PROMOTERS INDUCED UPON IMMUNE CELL ACTIVATION.
    KEL A.E., KEL-MARGOULIS O.V., BABENKO V.N., WINGENDER E.
• KEL-MARGOULIS O.V.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • COMPEL: A DATABASE ON COMPOSITE REGULATORY ELEMENTS.
    KEL-MARGOULIS O.V., KEL A.E., FRISCH M., ROMASHCHENKO A.G., KOLCHANOV N.A., WINGENDER E.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • COMBINATORIAL IDENTIFICATION OF PROMOTERS INDUCED UPON IMMUNE CELL ACTIVATION.
    KEL A.E., KEL-MARGOULIS O.V., BABENKO V.N., WINGENDER E.
• KENTA HASHIMOTO
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• KISSELEV L.L.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
  • EUKARYOTIC MRNAS ENCODING ABUNDANT AND SCARCE PROTEINS ARE DISSIMILAR IN MANY STRUCTURAL FEATURES OF 5’-UNTRANSLATED LEADERS.
    KOCHETOV A.V., PONOMARENKO M.P., VOROBIEV D.G., FROLOV A.S., KISSELEV L.L., KOLCHANOV N.A.
  • INVARIANT SECONDARY STRUCTURE OF ALU REPEATS PREDETERMINES CLUSTERIZATION OF REGULATORY ELEMENTS IN HUMAN GENOME.
    BLINOV V.M., UVAROV D.L., RESENCHUK S.M., CHIRIKOVA G.B., KISSELEV L.L.
• KOBZEV V.F.
  • QUANTITATIVE COMPUTER-ASSISTED ANALYSIS OF THE TATA-BINDING PROTEIN AFFINITY FOR COMPLEMENTARY DUPLEXES OF SYNTHETIC OLIGODEOXYRIBONUCLEOTIDES.
    SAVINKOVA L.K., SOKOLENKO A.A., RAU V.A., KOBZEV V.F., PONOMARENKO M.P., PONOMARENKO J.V., KOLCHANOV N.A.
  • STRUCTURE-FUNCTIONAL HOMOLOGY OF THE PROKARYOTIC AND EUKARYOTIC RNA POLYMERASES.
    SAVINKOVA L.K., SOKOLENKO A.A., SEDOVA V.M., RAU V.A., TULOKHONOV I.I, KOBZEV V.F., ARSHINOVA T.V.
    
• KOCHETOV A.V.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • STRUCTURAL AND COMPOSITIONAL FEATURES OF 5’ UNTRANSLATED REGIONS OF HIGHER PLANT MRNAS.
    KOCHETOV A.V., PILUGIN M.V., KOLPAKOV F.A., BABENKO V.N., KVASHNINA E.V., SHUMNY V.K.
  • EUKARYOTIC MRNAS ENCODING ABUNDANT AND SCARCE PROTEINS ARE DISSIMILAR IN MANY STRUCTURAL FEATURES OF 5’-UNTRANSLATED LEADERS.
    KOCHETOV A.V., PONOMARENKO M.P., VOROBIEV D.G., FROLOV A.S., KISSELEV L.L., KOLCHANOV N.A.
• KOKOZA E.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
• KOLASKAR A.S.
  • USE OF BIOINFORMATICS IN DEVELOPMENT OF PEPTIDE VACCINE.
    KOLASKAR A.S., URMILA KULKARNI-KALE, GORE M.M.
• KOLCHANOV N.A.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • COMPEL: A DATABASE ON COMPOSITE REGULATORY ELEMENTS.
    KEL-MARGOULIS O.V., KEL A.E., FRISCH M., ROMASHCHENKO A.G., KOLCHANOV N.A., WINGENDER E.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • GENE NETWORKS: A DATABASE AND ITS AUTOMATED VISUALIZATION THROUGH THE INTERNET IN THE GENENET COMPUTING SYSTEM.
    ANANKO E.A., KOLPAKOV F.A., KOLESOV G.B., KOLCHANOV N.A.
  • REGULATION MECHANISMS IN BIOLOGICAL SYSTEMS.
    KOLCHANOV N.A., MATUSHKIN Yu.G., FROLOV A.S.
  • RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
  • QUANTITATIVE COMPUTER-ASSISTED ANALYSIS OF THE TATA-BINDING PROTEIN AFFINITY FOR COMPLEMENTARY DUPLEXES OF SYNTHETIC OLIGODEOXYRIBONUCLEOTIDES.
    SAVINKOVA L.K., SOKOLENKO A.A., RAU V.A., KOBZEV V.F., PONOMARENKO M.P., PONOMARENKO J.V., KOLCHANOV N.A.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.
  • EUKARYOTIC MRNAS ENCODING ABUNDANT AND SCARCE PROTEINS ARE DISSIMILAR IN MANY STRUCTURAL FEATURES OF 5’-UNTRANSLATED LEADERS.
    KOCHETOV A.V., PONOMARENKO M.P., VOROBIEV D.G., FROLOV A.S., KISSELEV L.L., KOLCHANOV N.A.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
  • PREDICTING RNA FOLDING BY GENETIC ALGORITHM WITH LOCAL EXHAUSTION.
    TITOV I.I., IVANISENKO V.A., KOLCHANOV N.A.
  • LIKENESS: A SYSTEM SEARCHING FOR AND ALIGNING SIMILAR PROTEIN CONFORMATIONS.
    PONOMARENKO M.P., KOLCHANOV N.A., SHINDYALOV I., BOURNE P.
    
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • NEW METHOD FOR THE STUDY OF THE MODULAR STRUCTURE OF TRANSCRIPTION REGULATORY REGIONS.
    KOLESOV G.B., KOLPAKOV F.A., KOLCHANOV N.A.
  • SIGNIFICANT B-DNA CONFORMATIONAL AND PHYSICO-CHEMICAL PROPERTIES OF THE DNA TOPOISOMERASE I SITES.
    PONOMARENKO M.P., VOROBIEV D.G., PONOMARENKO J.V., KUZIN F.E., GRUZDEV A.D., KOLCHANOV N.A.
• KOLESNIKOV N.N.
  • THREE SUBFAMILIES OF SHORT INTERSPERSED ELEMENTS OF THE DOG GENOME: POSSIBLE ORIGIN AND FUNCTIONS.
    KOLESNIKOV N.N., ROGOZIN I.B., LAVRENTIEVA M.V., ELISAPHENKO E.A.
    
• KOLESOV G.B.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • GENE NETWORKS: A DATABASE AND ITS AUTOMATED VISUALIZATION THROUGH THE INTERNET IN THE GENENET COMPUTING SYSTEM.
    ANANKO E.A., KOLPAKOV F.A., KOLESOV G.B., KOLCHANOV N.A.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
  • THE PRACTICAL STUDY OF THE BEHAVIOR OF THE COMPLEX DYNAMIC SYSTEMS ON THE BASIS OF THE LIFE GAME FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    AFONNIKOV D., KOLESOV G.B., MININA A.V., MIKHAILOV Yu.I., IVASHIN S.A.
  • NEW METHOD FOR THE STUDY OF THE MODULAR STRUCTURE OF TRANSCRIPTION REGULATORY REGIONS.
    KOLESOV G.B., KOLPAKOV F.A., KOLCHANOV N.A.
• KOLOCHEVA T.A.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
• KOLPAKOV A.
  • CONTEXT-FREE METHOD OF PATTERN RECOGNITION IN THE GENETIC TEXTS.
    AKBEROVA N., KOLPAKOV A., LEONTIEV A.
• KOLPAKOV F.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • GENE NETWORKS: A DATABASE AND ITS AUTOMATED VISUALIZATION THROUGH THE INTERNET IN THE GENENET COMPUTING SYSTEM.
    ANANKO E.A., KOLPAKOV F.A., KOLESOV G.B., KOLCHANOV N.A.
  • STRUCTURAL AND COMPOSITIONAL FEATURES OF 5’ UNTRANSLATED REGIONS OF HIGHER PLANT MRNAS.
    KOCHETOV A.V., PILUGIN M.V., KOLPAKOV F.A., BABENKO V.N., KVASHNINA E.V., SHUMNY V.K.
  • MGL-PROT: THE ANTHOLOGY-BASED QUERY LANGUAGE FOR THE USER SEARCH FOR THE 3D STRUCTURES AND FUNCTIONS OF PROTEINS IN THE WWW-AVAILABLE DATABASES.
    KOLPAKOV F.A., FROLOV A.S., PONOMARENKO M.P., PODKOLODNY N.L.
  • RAPID ESTIMATES OF STATISTICAL SIGNIFICANCE OF THE PAIRWISE NUCLEOTIDE SEQUENCE ALIGNMENT.
    SELEDTSOV I.A., KOLPAKOV F.A.
  • NEW METHOD FOR THE STUDY OF THE MODULAR STRUCTURE OF TRANSCRIPTION REGULATORY REGIONS.
    KOLESOV G.B., KOLPAKOV F.A., KOLCHANOV N.A.
  • MGL: AN OBJECT-ORIENTED COMPUTER SYSTEM FOR MOLECULAR GENETIC DATA MANAGEMENT, ANALYSIS, AND VISUALIZATION.
    KOLPAKOV F.A., BABENKO V.N.
    
• KONDRAKHIN Y.V.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • RECOGNITION OF THE SUBSET OF EUKARYOTIC PROMOTERS.
    KONDRAKHIN Y.V., OVERTON G.C.
• KONEVA E.I.
  • BUSINESS GAME EQUILIBRIUM FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., MININA A.V., KONEVA E.I., MIKHAILOV Yu.I., IVASHIN S.A.
• KONSTANTINOV Yu.M.
  • THE LEUCINE MOTIF IN SUBUNITS 6 AND 9 OF PLANT MITOCHONDRIAL ATP SYNTHASE PROVIDING PRESUMABLY THE ASSEMBLY OF THE MEMBRANE PART OF THE ENZYME.
    KONSTANTINOV Yu.M., ARZIEV A.Sh., PODSOSONNY V.A.
  • THE SEQUENCING AND MOLECULAR ANALYSIS OF COXI GENE FRAGMENTS OF WILD PERENNIAL CROP ELYMUS SIBIRICUS L..
    FALSHINA I.V., VERBITSKII D.S., ROGOZIN I.B., KONSTANTINOV Yu.M., TAUSON E.L.
• KOONIN E.V.
  • A NATURAL TAXONOMY OF GENE FAMILIES FROM COMPLETE GENOMES.
    TATUSOV R.L., KOONIN E.V., LIPMAN D.J.
• KOROTKOV E.V.
  • TRIPLET PERIODICITY OF THE DNA CODING AND NONCODING REGIONS.
    RUDENKO V.M., KOROTKOV E.V.
  • A PROBABLE MUTUAL RELATIONSHIP BETWEEN LATENT PERIODIC GENE STRUCTURE AND PERIODIC CONFORMATION OF THE PROTEIN.
    CHALEY M.B., KOROTKOV E.V.
  • LATENT PERIODICITY OF PROTEIN SEQUENCES.
    KOROTKOV E.V., KOROTKOVA M.A.
• KOROTKOVA M.A.
  • LATENT PERIODICITY OF PROTEIN SEQUENCES.
    KOROTKOV E.V., KOROTKOVA M.A.
• KOSAREV P.
  • PROMOTERS: AT/GC CONTENT AND PROPERTIES OF TATA BOX.
    KOSAREV P., BABENKO V.N.
    
• KOTOKO NAKATA
  • DEVELOPMENT OF A RECEPTOR DATABASE.
    KOTOKO NAKATA, TAKAKO TAKAI, TSUGUCHIKA KAMINUMA
• KOUICHI TAKAHASHI
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• KROGH ANDERS
  • A MODULAR METAPROFILE-BASED SYSTEM FOR PREDICTION AND ANALYSIS OF EUKARYOTIC PROMOTERS.
    JUNIER THOMAS, KROGH ANDERS, BUCHER PHILIPP
    
• KROPATCHEV K.Y.
  • THE GLUCOCORTICOID-CONTROLLED GENE REGULATORY REGIONS DATABASE (GR-TRRD): THE USING FOR THE ELUCIDATION OF THE MECHANISMS OF CHEMICAL HEPATOCARCINOGENS ACTION.
    MERKULOVA T.I., MERKLOV V.M., KROPATCHEV K.Y., KALEDIN V.I.
• KUROPATOV D.A.
  • AUTOMATIC GENERATION OF RECOGNITION PROGRAMS FOR AMINO ACID SEQUENCES.
    VALUEV V.P., KUROPATOV D.A., PONOMARENKO M.P.
• KUTUZOVA G.I.
  • MOLECULAR MECHANISMS OF PROMOTER-POLYMERASE RECOGNITION. ELECTROSTATIC INTERACTIONS IN PROMOTERS RECOGNIZED BY E.COLI Esigma70.
    KAMZOLOVA S.G., DZHELYADIN T.R., SOROKIN A.A., IVANOVA N.N., KUTUZOVA G.I., ESIPOVA N.G., POLOZOV R.V.
• KUVSHINOV V.N.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• KUZIN F.E.
  • SIGNIFICANT B-DNA CONFORMATIONAL AND PHYSICO-CHEMICAL PROPERTIES OF THE DNA TOPOISOMERASE I SITES.
    PONOMARENKO M.P., VOROBIEV D.G., PONOMARENKO J.V., KUZIN F.E., GRUZDEV A.D., KOLCHANOV N.A.
• KVASHNINA E.V.
  • STRUCTURAL AND COMPOSITIONAL FEATURES OF 5’ UNTRANSLATED REGIONS OF HIGHER PLANT MRNAS.
    KOCHETOV A.V., PILUGIN M.V., KOLPAKOV F.A., BABENKO V.N., KVASHNINA E.V., SHUMNY V.K.

L

• LANGE M
  • MOLECULAR DATABASE INTEGRATION: ANALYSIS OF METABOLIC NETWORK CONTROL.
    FREIER A., HODING M., HOFESTADT R., LANGE M, SCHOLZ U.
• LAVRENTIEVA M.V.
  • THREE SUBFAMILIES OF SHORT INTERSPERSED ELEMENTS OF THE DOG GENOME: POSSIBLE ORIGIN AND FUNCTIONS.
    KOLESNIKOV N.N., ROGOZIN I.B., LAVRENTIEVA M.V., ELISAPHENKO E.A.
    
• LAVRYUSHEV S.V.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • A SYSTEM FOR ACTIVATION OF THE TRRD DATABASE: FURTHER DEVELOPMENT OF GENEEXPRESS.
    FROLOV A.S., LAVRYUSHEV S.V., VOROBIEV D.G., GRIGOROVICH D.A.
• LEFRANC MARIE-PAULE
  • IMGT ALGORITHM AND RULES FOR IMMUNOGLOBULIN AND T-CELL RECEPTOR MOTIF RECOGNITION.
    GIUDICELLI VERONIQUE, CHAUME DENYS, MENNESSIER GERARD, LEFRANC MARIE-PAULE
• LEONTIEV A.
  • CONTEXT-FREE METHOD OF PATTERN RECOGNITION IN THE GENETIC TEXTS.
    AKBEROVA N., KOLPAKOV A., LEONTIEV A.
• LEVITSKY V.G.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • FINE STRUCTURE OF THE PROFILE OF BENDING STIFFNESS ENERGY OF NUCLEOSOMAL DNA.
    LEVITSKY V.G.
• LIKHACHEVA E.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
• LIKHOSHVAI V.A.
  • THEORETICAL ANALYSIS OF POSSIBLE EVOLUTIONARY TRENDS IN CODON DISTRIBUTION ALONG THE mRNA.
    LIKHOSHVAI V.A., MATUSHKIN Yu.G.
• LIMSOON WONG
  • EXTRACTING KOZAK CONSENSUS SEQUENCE USING KLEISLI.
    JING CHEN, NAM-HAI CHUA, DAPHNA STRAUSS, LIMSOON WONG
• LIPMAN D.J.
  • A NATURAL TAXONOMY OF GENE FAMILIES FROM COMPLETE GENOMES.
    TATUSOV R.L., KOONIN E.V., LIPMAN D.J.
• LOBRY J.R.
  • ASYMMETRICAL CODING SEQUENCE REPARTITION AND CODON ADAPTATION INDEX VALUES BETWEEN LEADING AND LAGGING STRANDS IN SEVEN BACTERIAL SPECIES.
    PERRIERE G., LOBRY J.R.
• LUKASHEV V.A.
  • DISTURBANCES OF GENOM REGULATION AS THE CONSEQUENCE OF THE STRUCTURAL LIKENESS OF HIV-1 ENV PROTEINS AND HUMAN APOLIPOPROTEIN A-I.
    PANIN L.E., LUKASHEV V.A., GIMAUTDINOVA O.I.
  • ANTIGENIC MIMICRY OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 AS A RESULT OF STRUCTURAL SIMILARITY OF PROTEIN GP120 AND HUMAN APOLIPOPROTEIN A-1.
    LUKASHEV V.A., FROLOV A.S., PANIN L.E., GIMAUTDINOVA O.I.

M

• MARTYNOV Yu.A.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• MARTYNYUK R.A.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• MATUSHKIN Yu.G.
  • REGULATION MECHANISMS IN BIOLOGICAL SYSTEMS.
    KOLCHANOV N.A., MATUSHKIN Yu.G., FROLOV A.S.
  • THEORETICAL ANALYSIS OF POSSIBLE EVOLUTIONARY TRENDS IN CODON DISTRIBUTION ALONG THE mRNA.
    LIKHOSHVAI V.A., MATUSHKIN Yu.G.
  • THEORETICAL ANALYSIS OF MUTATION PATTERN OF THE CYTOCHROME P450 SUPERFAMILY.
    MATUSHKIN Yu.G., MOROZOVA I.N., MOROZOV P.S.
• MEEK S.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
• MENDOZA LUIS
  • FLOWER MORPHOGENESIS IN ARABIDOPSIS THALIANA: A LOGICAL ANALYSIS.
    MENDOZA LUIS, ALVAREZ-BUYLLA ELENA, THIEFFRY DENIS
• MENNESSIER GERARD
  • IMGT ALGORITHM AND RULES FOR IMMUNOGLOBULIN AND T-CELL RECEPTOR MOTIF RECOGNITION.
    GIUDICELLI VERONIQUE, CHAUME DENYS, MENNESSIER GERARD, LEFRANC MARIE-PAULE
• MERKLOV V.M.
  • THE GLUCOCORTICOID-CONTROLLED GENE REGULATORY REGIONS DATABASE (GR-TRRD): THE USING FOR THE ELUCIDATION OF THE MECHANISMS OF CHEMICAL HEPATOCARCINOGENS ACTION.
    MERKULOVA T.I., MERKLOV V.M., KROPATCHEV K.Y., KALEDIN V.I.
• MERKULOVA T.I.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • THE GLUCOCORTICOID-CONTROLLED GENE REGULATORY REGIONS DATABASE (GR-TRRD): THE USING FOR THE ELUCIDATION OF THE MECHANISMS OF CHEMICAL HEPATOCARCINOGENS ACTION.
    MERKULOVA T.I., MERKLOV V.M., KROPATCHEV K.Y., KALEDIN V.I.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
• MIKHAILOV Yu.I.
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • BUSINESS GAME EQUILIBRIUM FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., MININA A.V., KONEVA E.I., MIKHAILOV Yu.I., IVASHIN S.A.
  • THE PRACTICAL STUDY OF THE BEHAVIOR OF THE COMPLEX DYNAMIC SYSTEMS ON THE BASIS OF THE LIFE GAME FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    AFONNIKOV D., KOLESOV G.B., MININA A.V., MIKHAILOV Yu.I., IVASHIN S.A.
  • BUSINESS GAME HUMAN GENOME FOR EDUCATION IN BUSINESS, LAW AND COMMERCE.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., MININA A.V., IVASHIN S.A., MIKHAILOV Yu.I.
• MILANESI L.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • WEBGENE: INTERACTIVE TOOLS FOR PREDICTION AND ANALYSIS OF PROTEIN-CODING GENES STRUCTURE IN INTERNET.
    MILANESI L., ROGOZIN I.B., D’ANGELO D.
    
• MININA A.V.
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • BUSINESS GAME EQUILIBRIUM FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., MININA A.V., KONEVA E.I., MIKHAILOV Yu.I., IVASHIN S.A.
  • THE PRACTICAL STUDY OF THE BEHAVIOR OF THE COMPLEX DYNAMIC SYSTEMS ON THE BASIS OF THE LIFE GAME FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    AFONNIKOV D., KOLESOV G.B., MININA A.V., MIKHAILOV Yu.I., IVASHIN S.A.
  • BUSINESS GAME HUMAN GENOME FOR EDUCATION IN BUSINESS, LAW AND COMMERCE.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., MININA A.V., IVASHIN S.A., MIKHAILOV Yu.I.
• MIRONOV A.A.
  • COMPUTER ANALYSIS OF TRANSCRIPTION REGULATORY PATTERNS IN COMPLETELY SEQUENCED BACTERIAL GENOMES.
    GELFAND M.S., MIRONOV A.A.
  • GENE RECOGNITION USING EST DATA: UNEXPECTEDLY FREQUENT ALTERNATIVE SPLICING OF HUMAN GENES.
    MIRONOV A.A., GELFAND M.S.
• MISHCHENKO T.M.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
• MIWA JOHJI
  • A THREE-LAYER MODEL FOR DESCRIBING DEVELOPMENT OF C.ELEGANS.
    TSUGUCHIKA KAMINUMA, IGARASHI TAKAKO, NAKANO TATSUYA, SASAKI SHINYA, MIWA JOHJI
• MOLODIN V.I.
  • RECONSTRUCTION OF THE GENOFOND PECULIARITIES OF THE ANCIENT PAZYRYK POPULATION (I-II MILLENIUM BC) FROM GORNY ALTAI ACCORDING TO THE MTDNA STRUCTURE.
    VOEVODA M.I., SITNIKOVA V.V., ROMASHCHENKO A.G., CHIKISHEVA T.A., POLOS’MAK N.V., MOLODIN V.I.
• MOROZOV P.S.
  • THEORETICAL ANALYSIS OF MUTATION PATTERN OF THE CYTOCHROME P450 SUPERFAMILY.
    MATUSHKIN Yu.G., MOROZOVA I.N., MOROZOV P.S.
• MOROZOVA I.N.
  • THEORETICAL ANALYSIS OF MUTATION PATTERN OF THE CYTOCHROME P450 SUPERFAMILY.
    MATUSHKIN Yu.G., MOROZOVA I.N., MOROZOV P.S.
• MUSTAFAYEV N.Sh.
  • SOME POSSIBLE ELEMENTS OF TRANSCRIPTION REGULATION OF RICE CHLOROPLAST ENCODED GENES.
    SHAHMURADOV I.A., MUSTAFAYEV N.Sh., ALIEV J.A. 
    

N

• NAKANO TATSUYA
  • A THREE-LAYER MODEL FOR DESCRIBING DEVELOPMENT OF C.ELEGANS.
    TSUGUCHIKA KAMINUMA, IGARASHI TAKAKO, NAKANO TATSUYA, SASAKI SHINYA, MIWA JOHJI
• NAM-HAI CHUA
  • EXTRACTING KOZAK CONSENSUS SEQUENCE USING KLEISLI.
    JING CHEN, NAM-HAI CHUA, DAPHNA STRAUSS, LIMSOON WONG
• NAUMOCHKIN A.N.
  • PROGRAMS FOR DATA INPUT TO THE TRANSCRIPTION REGULATORY REGIONS DATABASE.
    ANANKO E.A., NAUMOCHKIN A.N., FOKIN O.N., FROLOV A.S.
• NEFEDOV V.P.
  • GENETIC LEVEL OF BIOPROCESSES REGULATION AND BIOSYSTEMS IN EXTREME CONDITIONS.
    NEFEDOV V.P., CHEREPANOVA E.Yu.
    
• NEVINSKY G.A.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
  • INTERPRETATION OF X-RAY ANALYSIS DATA OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE ENZYME.
    BUGREEV D.V., VASYUTINA E.L., BUNEVA V.N., NEVINSKY G.A.
  • LACTOFERRIN IS A NEW TRANSCRIPTIONAL FACTOR HAVING MANY DIFFERENT UNIQUE BIOLOGICAL FUNCTIONS.
    KANYSHKOVA T.G., SEMENOV D.V., BUNEVA V.N., NEVINSKY G.A.
• NISHIKAWA KEN
  • DETECTION OF SIMILAR PROTEINS BY THE INVERSE-FOLDING PROTOCOL.
    OTA MOTONORI, NISHIKAWA KEN

O

• ORENGO CHRISTINE
  • STRUCTURAL AND FUNCTIONAL ANNOTATION OF GENOMIC SEQUENCES:ASSIGNMENT OF FOLD FAMILY AND SORTING OF PROTEINS WITH RESPECT TO SUBCELLULAR LOCALIZATION.
    EISENHABER FRANK, BORK PEER, HUYNEN MARTIJN, ORENGO CHRISTINE, SCHULTZ JORG, SUNYAEV SHAMIL R., YUAN YANPING
• ORESHKOVA S.F.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• ORLOV S.
  • FUNCTIONAL ACTIVITY OF A NOVEL GCC-ELEMENT FOUND IN HOMOLOGOUS REGULATORY REGIONS OF SOME HUMAN GENES.
    PEREVOZCHIKOV A., ORLOV S.
• OSADA YUKO
  • COMPUTER ANALYSIS OF BASE PAIRING FREE-ENERGY BETWEEN SHINE-DALGARNO SEQUENCE AND 16S RRNA SEQUENCE IN VARIOUS PROCARYOTES.
    OSADA YUKO, RINTARO SAITO, TOMITA MASARU
• OSTELL J.
  • GENOMES DATA IN ENTREZ: REPRESENTATION AND ANALYSIS.
    TATUSOVA T.A., OSTELL J.
• OTA MOTONORI
  • DETECTION OF SIMILAR PROTEINS BY THE INVERSE-FOLDING PROTOCOL.
    OTA MOTONORI, NISHIKAWA KEN
• OVERTON G.C.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • RECOGNITION OF THE SUBSET OF EUKARYOTIC PROMOTERS.
    KONDRAKHIN Y.V., OVERTON G.C.
  • RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.

P

• PANIN L.E.
  • DISTURBANCES OF GENOM REGULATION AS THE CONSEQUENCE OF THE STRUCTURAL LIKENESS OF HIV-1 ENV PROTEINS AND HUMAN APOLIPOPROTEIN A-I.
    PANIN L.E., LUKASHEV V.A., GIMAUTDINOVA O.I.
  • ANTIGENIC MIMICRY OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 AS A RESULT OF STRUCTURAL SIMILARITY OF PROTEIN GP120 AND HUMAN APOLIPOPROTEIN A-1.
    LUKASHEV V.A., FROLOV A.S., PANIN L.E., GIMAUTDINOVA O.I.
• PANKRATOVA E.V.
  • OCT PROTEINS AND OCT GENES: DNA RECOGNITION AND TRANSCRIPTIONALREGULATION.
    POLANOVSKY O.L., PANKRATOVA E.V., STEPCHENKO A.G.
• PEDERSEN ANDERS GORM
  • DNA STRUCTURE IN HUMAN RNA POLYMERASE II PROMOTERS.
    PEDERSEN ANDERS GORM, BALDI PIERRE, CHAUVIN YVES, BRUNAK SOREN
    
• PELTEK S.E.
  • PLANT-TRRD DATABASE.
    GORYACHKOVSKY T.N., ANANKO E.A., PELTEK S.E.
• PEREGOEDOVA E.L.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
• PEREVOZCHIKOV A.
  • FUNCTIONAL ACTIVITY OF A NOVEL GCC-ELEMENT FOUND IN HOMOLOGOUS REGULATORY REGIONS OF SOME HUMAN GENES.
    PEREVOZCHIKOV A., ORLOV S.
• PEREZ-RUEDA E.
  • ANALYSIS OF TRANSCRIPTIONAL FACTORS IN E. COLI.
    PEREZ-RUEDA E., VAN HELDEN J., WODAK S., COLLADO-VIDES J.
    
• PERRIERE G.
  • ASYMMETRICAL CODING SEQUENCE REPARTITION AND CODON ADAPTATION INDEX VALUES BETWEEN LEADING AND LAGGING STRANDS IN SEVEN BACTERIAL SPECIES.
    PERRIERE G., LOBRY J.R.
• PESHKIN L.
  • SEGMENTATION OF YEAST DNA USING HIDDEN MARKOV MODELS.
    PESHKIN L., GELFAND M.S.
• PETROV N.A.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• PILUGIN M.V.
  • STRUCTURAL AND COMPOSITIONAL FEATURES OF 5’ UNTRANSLATED REGIONS OF HIGHER PLANT MRNAS.
    KOCHETOV A.V., PILUGIN M.V., KOLPAKOV F.A., BABENKO V.N., KVASHNINA E.V., SHUMNY V.K.
• PINCHUK A.O.
  • SOME PECULIARITIES OF LONG-RANGE INTERACTION BETWEEN NUCLEOTIDES IN THE INTRACELLULAR LIQUIDS.
    PINCHUK A.O., VYSOTSKII V.I.
• PODKOLODNAYA O.A.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • THE ESRG-TRRD: DATABASE OF GENES WITH SPECIFIC TRANSCRIPTION REGULATION IN ERYTHROID CELLS.
    PODKOLODNAYA O.A., STEPANENKO I.L.
  • SAMPLES AND ALIGNED: DATABASES FOR FUNCTIONAL SITE SEQUENCES.
    VOROBIEV D.G., PONOMARENKO J.V., PODKOLODNAYA O.A.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • SEARCH FOR DEGENERATE OLIGONUCLEOTIDE MOTIFS IN TRANSCRIPTION FACTOR BINDING SITES AND EUKARYOTIC PROMOTERS (THE SYSTEM ARGO).
    VISHNEVSKY O.V., PODKOLODNAYA O.A., BABENKO V.N.
    
  • RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.
• PODKOLODNY N.L.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.
  • MGL-PROT: THE ANTHOLOGY-BASED QUERY LANGUAGE FOR THE USER SEARCH FOR THE 3D STRUCTURES AND FUNCTIONS OF PROTEINS IN THE WWW-AVAILABLE DATABASES.
    KOLPAKOV F.A., FROLOV A.S., PONOMARENKO M.P., PODKOLODNY N.L.
• PODSOSONNY V.A.
  • THE LEUCINE MOTIF IN SUBUNITS 6 AND 9 OF PLANT MITOCHONDRIAL ATP SYNTHASE PROVIDING PRESUMABLY THE ASSEMBLY OF THE MEMBRANE PART OF THE ENZYME.
    KONSTANTINOV Yu.M., ARZIEV A.Sh., PODSOSONNY V.A.
• POKROVSKI SERGEI V.
  • A PROGRAM FOR CALCULATING GAPPED DINUCLEOTIDE CORRELATIONS IN NUCLEIC ACID SEQUENCES AND ITS APPLICATION TO REVEAL SPECIFIC SEQUENCE FEATURES OF X-LINKED PROMOTERS IN DROSOPHILA.
    ARKHIPOVA IRINA R., POKROVSKI SERGEI V.
• POLANOVSKY O.L.
  • OCT PROTEINS AND OCT GENES: DNA RECOGNITION AND TRANSCRIPTIONALREGULATION.
    POLANOVSKY O.L., PANKRATOVA E.V., STEPCHENKO A.G.
• POLOS’MAK N.V.
  • RECONSTRUCTION OF THE GENOFOND PECULIARITIES OF THE ANCIENT PAZYRYK POPULATION (I-II MILLENIUM BC) FROM GORNY ALTAI ACCORDING TO THE MTDNA STRUCTURE.
    VOEVODA M.I., SITNIKOVA V.V., ROMASHCHENKO A.G., CHIKISHEVA T.A., POLOS’MAK N.V., MOLODIN V.I.
• POLOZOV R.V.
  • MOLECULAR MECHANISMS OF PROMOTER-POLYMERASE RECOGNITION. ELECTROSTATIC INTERACTIONS IN PROMOTERS RECOGNIZED BY E.COLI Esigma70.
    KAMZOLOVA S.G., DZHELYADIN T.R., SOROKIN A.A., IVANOVA N.N., KUTUZOVA G.I., ESIPOVA N.G., POLOZOV R.V.
• PONOMARENKO J.V.
  • SAMPLES AND ALIGNED: DATABASES FOR FUNCTIONAL SITE SEQUENCES.
    VOROBIEV D.G., PONOMARENKO J.V., PODKOLODNAYA O.A.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
  • QUANTITATIVE COMPUTER-ASSISTED ANALYSIS OF THE TATA-BINDING PROTEIN AFFINITY FOR COMPLEMENTARY DUPLEXES OF SYNTHETIC OLIGODEOXYRIBONUCLEOTIDES.
    SAVINKOVA L.K., SOKOLENKO A.A., RAU V.A., KOBZEV V.F., PONOMARENKO M.P., PONOMARENKO J.V., KOLCHANOV N.A.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.
  • CLASSIFICATION OF EUKARYOTIC TRANSCRIPTION FACTORS BASED ON SIGNIFICANT B-DNA CONFORMATIONAL AND PHYSICO-CHEMICAL PROPERTIES OF THEIR BINDING SITES.
    PONOMARENKO J.V.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • BUSINESS GAME HUMAN GENOME FOR EDUCATION IN BUSINESS, LAW AND COMMERCE.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., MININA A.V., IVASHIN S.A., MIKHAILOV Yu.I.
  • SIGNIFICANT B-DNA CONFORMATIONAL AND PHYSICO-CHEMICAL PROPERTIES OF THE DNA TOPOISOMERASE I SITES.
    PONOMARENKO M.P., VOROBIEV D.G., PONOMARENKO J.V., KUZIN F.E., GRUZDEV A.D., KOLCHANOV N.A.
• PONOMARENKO M.P.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
  • QUANTITATIVE COMPUTER-ASSISTED ANALYSIS OF THE TATA-BINDING PROTEIN AFFINITY FOR COMPLEMENTARY DUPLEXES OF SYNTHETIC OLIGODEOXYRIBONUCLEOTIDES.
    SAVINKOVA L.K., SOKOLENKO A.A., RAU V.A., KOBZEV V.F., PONOMARENKO M.P., PONOMARENKO J.V., KOLCHANOV N.A.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.
  • EUKARYOTIC MRNAS ENCODING ABUNDANT AND SCARCE PROTEINS ARE DISSIMILAR IN MANY STRUCTURAL FEATURES OF 5’-UNTRANSLATED LEADERS.
    KOCHETOV A.V., PONOMARENKO M.P., VOROBIEV D.G., FROLOV A.S., KISSELEV L.L., KOLCHANOV N.A.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
  • MGL-PROT: THE ANTHOLOGY-BASED QUERY LANGUAGE FOR THE USER SEARCH FOR THE 3D STRUCTURES AND FUNCTIONS OF PROTEINS IN THE WWW-AVAILABLE DATABASES.
    KOLPAKOV F.A., FROLOV A.S., PONOMARENKO M.P., PODKOLODNY N.L.
  • LIKENESS: A SYSTEM SEARCHING FOR AND ALIGNING SIMILAR PROTEIN CONFORMATIONS.
    PONOMARENKO M.P., KOLCHANOV N.A., SHINDYALOV I., BOURNE P.
    
  • AUTOMATIC GENERATION OF RECOGNITION PROGRAMS FOR AMINO ACID SEQUENCES.
    VALUEV V.P., KUROPATOV D.A., PONOMARENKO M.P.
  • BIOINFORMATICS FOR HUMANITARIANS.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., PONOMARENKO J.V., KOLCHANOV N.A., MIKHAILOV Yu.I., MININA A.V., IVASHIN S.A.
  • BUSINESS GAME EQUILIBRIUM FOR EDUCATION IN ECONOMICS, COMMERCE, AND LAW.
    PONOMARENKO M.P., ISHCHENKO I.V., FROLOV A.S., MININA A.V., KONEVA E.I., MIKHAILOV Yu.I., IVASHIN S.A.
  • BUSINESS GAME HUMAN GENOME FOR EDUCATION IN BUSINESS, LAW AND COMMERCE.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., MININA A.V., IVASHIN S.A., MIKHAILOV Yu.I.
  • SIGNIFICANT B-DNA CONFORMATIONAL AND PHYSICO-CHEMICAL PROPERTIES OF THE DNA TOPOISOMERASE I SITES.
    PONOMARENKO M.P., VOROBIEV D.G., PONOMARENKO J.V., KUZIN F.E., GRUZDEV A.D., KOLCHANOV N.A.
• POPOVA T.G.
  • AUTHOMATIC CLASSIFICATION OF NUCLEOTIDE SEQUENCES AND ITS RELATION TO NATURAL TAXONOMY AND PROTEIN FUNCTION.
    GORBAN A.N., POPOVA T.G., SADOVSKY M.G.
• PUZYREV A.A.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.

R

• RATNER V.A.
  • THEORY OF MOLECULAR GENETIC REGULATORY SYSTEMS (MGRS): KEY IDEAS AND RESULTS.
    RATNER V.A.
  • ANALYSIS OF FUNCTIONAL SITE MOTIFS OF MOBILE GENETIC ELEMENTS RELATIVE TO THEIR POSSIBLE MOLECULAR FUNCTIONS.
    AMIKISHIEV V.G., RATNER V.A.
• RAU V.A.
  • QUANTITATIVE COMPUTER-ASSISTED ANALYSIS OF THE TATA-BINDING PROTEIN AFFINITY FOR COMPLEMENTARY DUPLEXES OF SYNTHETIC OLIGODEOXYRIBONUCLEOTIDES.
    SAVINKOVA L.K., SOKOLENKO A.A., RAU V.A., KOBZEV V.F., PONOMARENKO M.P., PONOMARENKO J.V., KOLCHANOV N.A.
  • STRUCTURE-FUNCTIONAL HOMOLOGY OF THE PROKARYOTIC AND EUKARYOTIC RNA POLYMERASES.
    SAVINKOVA L.K., SOKOLENKO A.A., SEDOVA V.M., RAU V.A., TULOKHONOV I.I, KOBZEV V.F., ARSHINOVA T.V.
    
• REINITZ J.
  • GENET, A DATABASE OF GENETIC NETWORKS.
    SAMSONOVA M.G., SAVOSTYANOVA E.G., SEROV V.N., SPIROV A.V., REINITZ J.
• RESENCHUK S.M.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
  • INVARIANT SECONDARY STRUCTURE OF ALU REPEATS PREDETERMINES CLUSTERIZATION OF REGULATORY ELEMENTS IN HUMAN GENOME.
    BLINOV V.M., UVAROV D.L., RESENCHUK S.M., CHIRIKOVA G.B., KISSELEV L.L.
• RINTARO SAITO
  • ON NEGATIVE SELECTION AGAINST ATG TRIPLETS NEAR START CODONS IN EUCARYOTIC AND PROCARYOTIC GENOMES.
    RINTARO SAITO, TOMITA MASARU
  • COMPUTER ANALYSIS OF BASE PAIRING FREE-ENERGY BETWEEN SHINE-DALGARNO SEQUENCE AND 16S RRNA SEQUENCE IN VARIOUS PROCARYOTES.
    OSADA YUKO, RINTARO SAITO, TOMITA MASARU
• ROGOZIN I.B.
  • IN SILICO IDENTIFICATION OF MARS/SARS IN DNA SEQUENCES.
    GLAZKO G.V., ROGOZIN I.B., GLAZKOV M.V.
  • WEBGENE: INTERACTIVE TOOLS FOR PREDICTION AND ANALYSIS OF PROTEIN-CODING GENES STRUCTURE IN INTERNET.
    MILANESI L., ROGOZIN I.B., D’ANGELO D.
    
  • THREE SUBFAMILIES OF SHORT INTERSPERSED ELEMENTS OF THE DOG GENOME: POSSIBLE ORIGIN AND FUNCTIONS.
    KOLESNIKOV N.N., ROGOZIN I.B., LAVRENTIEVA M.V., ELISAPHENKO E.A.
    
  • SEARCHING FOR THE IMMUNOGLOBULIN SUPERFAMILY GENES IN C.ELEGANS.
    TARANIN A.V., ROGOZIN I.B.
  • REGRESSION ANALYSIS OF MUTATIONAL SPECTRA.
    ROGOZIN I.B., BERIKOV V.B.
    
  • THE SEQUENCING AND MOLECULAR ANALYSIS OF COXI GENE FRAGMENTS OF WILD PERENNIAL CROP ELYMUS SIBIRICUS L..
    FALSHINA I.V., VERBITSKII D.S., ROGOZIN I.B., KONSTANTINOV Yu.M., TAUSON E.L.
• ROMASHCHENKO A.G.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • COMPEL: A DATABASE ON COMPOSITE REGULATORY ELEMENTS.
    KEL-MARGOULIS O.V., KEL A.E., FRISCH M., ROMASHCHENKO A.G., KOLCHANOV N.A., WINGENDER E.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
  • RECONSTRUCTION OF THE GENOFOND PECULIARITIES OF THE ANCIENT PAZYRYK POPULATION (I-II MILLENIUM BC) FROM GORNY ALTAI ACCORDING TO THE MTDNA STRUCTURE.
    VOEVODA M.I., SITNIKOVA V.V., ROMASHCHENKO A.G., CHIKISHEVA T.A., POLOS’MAK N.V., MOLODIN V.I.
• ROYTBERG M.A.
  • SOME PROBLEMS OF GENE RECOGNITION IN PROTIST DNA.
    ASTAKHOVA T.V., GELFAND M.S., ROYTBERG M.A.
  • SEQUENCE ALIGNMENT WITHOUT GAP PENALTIES.
    ROYTBERG M.A., SEMIONENKOV M.N., TABOLINA O.Yu.
• RUDENKO V.M.
  • TRIPLET PERIODICITY OF THE DNA CODING AND NONCODING REGIONS.
    RUDENKO V.M., KOROTKOV E.V.
• RUZANKINA Ya.S.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.

S

• SADOVSKY M.G.
  • MAXIMUM ENTROPY PRINCIPLE AND MEASUREMENT OF INFORMATION CONTENT OF GENETIC TEXT.
    BUGAENKO N.N., GORBAN A.N., SADOVSKY M.G.
  • AUTHOMATIC CLASSIFICATION OF NUCLEOTIDE SEQUENCES AND ITS RELATION TO NATURAL TAXONOMY AND PROTEIN FUNCTION.
    GORBAN A.N., POPOVA T.G., SADOVSKY M.G.
• SAKURA TANIDA
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• SALAMOV A.A.
  • INFOGENE: A DATABASE OF KNOWN GENE STRUCTURES AND PREDICTED GENES AND PROTEINS IN SEQUENCES OF GENOME SEQUENCING PROJECTS.
    SOLOVYEV V.V., SALAMOV A.A.
• SALAS F.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
• SAMSONOVA M.G.
  • GENET, A DATABASE OF GENETIC NETWORKS.
    SAMSONOVA M.G., SAVOSTYANOVA E.G., SEROV V.N., SPIROV A.V., REINITZ J.
• SANDAKHCHIEV L.S.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• SAPOZHNIKOV A.N.
  • MINIMUM ENTROPY PRINCIPLE AND CLASSIFICATION OF SYMBOLS FOR REVEALING STATISTICAL REGULARITIES IN A TEXT.
    BUGAENKO N.N., GORBAN A.N., SAPOZHNIKOV A.N.
• SASAKI SHINYA
  • A THREE-LAYER MODEL FOR DESCRIBING DEVELOPMENT OF C.ELEGANS.
    TSUGUCHIKA KAMINUMA, IGARASHI TAKAKO, NAKANO TATSUYA, SASAKI SHINYA, MIWA JOHJI
• SAVINKOVA L.K.
  • QUANTITATIVE COMPUTER-ASSISTED ANALYSIS OF THE TATA-BINDING PROTEIN AFFINITY FOR COMPLEMENTARY DUPLEXES OF SYNTHETIC OLIGODEOXYRIBONUCLEOTIDES.
    SAVINKOVA L.K., SOKOLENKO A.A., RAU V.A., KOBZEV V.F., PONOMARENKO M.P., PONOMARENKO J.V., KOLCHANOV N.A.
  • STRUCTURE-FUNCTIONAL HOMOLOGY OF THE PROKARYOTIC AND EUKARYOTIC RNA POLYMERASES.
    SAVINKOVA L.K., SOKOLENKO A.A., SEDOVA V.M., RAU V.A., TULOKHONOV I.I, KOBZEV V.F., ARSHINOVA T.V.
    
• SAVOSTYANOVA E.G.
  • GENET, A DATABASE OF GENETIC NETWORKS.
    SAMSONOVA M.G., SAVOSTYANOVA E.G., SEROV V.N., SPIROV A.V., REINITZ J.
• SCHOLZ U.
  • MOLECULAR DATABASE INTEGRATION: ANALYSIS OF METABOLIC NETWORK CONTROL.
    FREIER A., HODING M., HOFESTADT R., LANGE M, SCHOLZ U.
• SCHULTZ JORG
  • STRUCTURAL AND FUNCTIONAL ANNOTATION OF GENOMIC SEQUENCES:ASSIGNMENT OF FOLD FAMILY AND SORTING OF PROTEINS WITH RESPECT TO SUBCELLULAR LOCALIZATION.
    EISENHABER FRANK, BORK PEER, HUYNEN MARTIJN, ORENGO CHRISTINE, SCHULTZ JORG, SUNYAEV SHAMIL R., YUAN YANPING
• SEDOVA V.M.
  • STRUCTURE-FUNCTIONAL HOMOLOGY OF THE PROKARYOTIC AND EUKARYOTIC RNA POLYMERASES.
    SAVINKOVA L.K., SOKOLENKO A.A., SEDOVA V.M., RAU V.A., TULOKHONOV I.I, KOBZEV V.F., ARSHINOVA T.V.
    
• SELEDTSOV I.A.
  • RAPID ESTIMATES OF STATISTICAL SIGNIFICANCE OF THE PAIRWISE NUCLEOTIDE SEQUENCE ALIGNMENT.
    SELEDTSOV I.A., KOLPAKOV F.A.
• SEMENOV D.V.
  • LACTOFERRIN IS A NEW TRANSCRIPTIONAL FACTOR HAVING MANY DIFFERENT UNIQUE BIOLOGICAL FUNCTIONS.
    KANYSHKOVA T.G., SEMENOV D.V., BUNEVA V.N., NEVINSKY G.A.
• SEMIONENKOV M.N.
  • SEQUENCE ALIGNMENT WITHOUT GAP PENALTIES.
    ROYTBERG M.A., SEMIONENKOV M.N., TABOLINA O.Yu.
• SEROV V.N.
  • GENET, A DATABASE OF GENETIC NETWORKS.
    SAMSONOVA M.G., SAVOSTYANOVA E.G., SEROV V.N., SPIROV A.V., REINITZ J.
• SHAHMURADOV I.A.
  • SOME POSSIBLE ELEMENTS OF TRANSCRIPTION REGULATION OF RICE CHLOROPLAST ENCODED GENES.
    SHAHMURADOV I.A., MUSTAFAYEV N.Sh., ALIEV J.A. 
    
• SHAM M.H.
  • LARGE SCALE SCREENING FOR TRANSCRIPTION REGULATORY SEQUENCES RECOGNISED BY HOX HOMEODOMAIN PROTEINS.
    JAKT L.M., SHAM M.H.
• SHINDYALOV I.
  • LIKENESS: A SYSTEM SEARCHING FOR AND ALIGNING SIMILAR PROTEIN CONFORMATIONS.
    PONOMARENKO M.P., KOLCHANOV N.A., SHINDYALOV I., BOURNE P.
    
• SHUMNY V.K.
  • STRUCTURAL AND COMPOSITIONAL FEATURES OF 5’ UNTRANSLATED REGIONS OF HIGHER PLANT MRNAS.
    KOCHETOV A.V., PILUGIN M.V., KOLPAKOV F.A., BABENKO V.N., KVASHNINA E.V., SHUMNY V.K.
• SITNIKOVA V.V.
  • RECONSTRUCTION OF THE GENOFOND PECULIARITIES OF THE ANCIENT PAZYRYK POPULATION (I-II MILLENIUM BC) FROM GORNY ALTAI ACCORDING TO THE MTDNA STRUCTURE.
    VOEVODA M.I., SITNIKOVA V.V., ROMASHCHENKO A.G., CHIKISHEVA T.A., POLOS’MAK N.V., MOLODIN V.I.
• SMITH S.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
• SOKOLENKO A.A.
  • QUANTITATIVE COMPUTER-ASSISTED ANALYSIS OF THE TATA-BINDING PROTEIN AFFINITY FOR COMPLEMENTARY DUPLEXES OF SYNTHETIC OLIGODEOXYRIBONUCLEOTIDES.
    SAVINKOVA L.K., SOKOLENKO A.A., RAU V.A., KOBZEV V.F., PONOMARENKO M.P., PONOMARENKO J.V., KOLCHANOV N.A.
  • STRUCTURE-FUNCTIONAL HOMOLOGY OF THE PROKARYOTIC AND EUKARYOTIC RNA POLYMERASES.
    SAVINKOVA L.K., SOKOLENKO A.A., SEDOVA V.M., RAU V.A., TULOKHONOV I.I, KOBZEV V.F., ARSHINOVA T.V.
    
• SOLOVYEV V.V.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • INFOGENE: A DATABASE OF KNOWN GENE STRUCTURES AND PREDICTED GENES AND PROTEINS IN SEQUENCES OF GENOME SEQUENCING PROJECTS.
    SOLOVYEV V.V., SALAMOV A.A.
• SOROKIN A.A.
  • MOLECULAR MECHANISMS OF PROMOTER-POLYMERASE RECOGNITION. ELECTROSTATIC INTERACTIONS IN PROMOTERS RECOGNIZED BY E.COLI Esigma70.
    KAMZOLOVA S.G., DZHELYADIN T.R., SOROKIN A.A., IVANOVA N.N., KUTUZOVA G.I., ESIPOVA N.G., POLOZOV R.V.
• SPIROV A.V.
  • HOX-PRO DB: THE WAYS OF EVOLUTION OF ENSEMBLES OF HOMEOBOX GENES-CONTROLLERS OF DEVELOPMENT.
    SPIROV A.V.
  • GENET, A DATABASE OF GENETIC NETWORKS.
    SAMSONOVA M.G., SAVOSTYANOVA E.G., SEROV V.N., SPIROV A.V., REINITZ J.
• STEPANENKO I.L.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
  • TRANSCRIPTION REGULATORY REGIONS DATABASE (TRRD): NEW POSSIBILITIES PROVIDED BY RELEASE 4.0.
    KOLCHANOV N.A., IGNATIEVA E.V., KEL-MARGOULIS O.V., KEL A.E., ANANKO E.A., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., GORYACHKOVSKY T.N., KOLPAKOV F.A., PODKOLODNY N.L., LAVRYUSHEV S.V., GRIGOROVICH D.A., FROLOV A.S., ROMASHCHENKO A.G.
  • THE ESRG-TRRD: DATABASE OF GENES WITH SPECIFIC TRANSCRIPTION REGULATION IN ERYTHROID CELLS.
    PODKOLODNAYA O.A., STEPANENKO I.L.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
• STEPCHENKO A.G.
  • OCT PROTEINS AND OCT GENES: DNA RECOGNITION AND TRANSCRIPTIONALREGULATION.
    POLANOVSKY O.L., PANKRATOVA E.V., STEPCHENKO A.G.
• STOECKERT S.
  • EPOGERD: A DATABASE ON REGULATION OF EUKARYOTIC GENE EXPRESSION.
    STOECKERT S., PODKOLODNAYA O.A., KEL A.E., BRUNK B., HAAS J., SALAS F., STEPANENKO I.L., IGNATIEVA E.V., KEL-MARGOULIS O.V., ANANKO E.A., PODKOLODNY N.L., OVERTON G.C., KOLCHANOV N.A.
• STORMO GARY D.
  • IDENTIFYING DNA AND PROTEIN PATTERNS WITH STATISTICALLY SIGNIFICANT ALIGNMENT MATRICES.
    HERTZ GERALD Z., STORMO GARY D.
• SUNYAEV SHAMIL R.
  • STRUCTURAL AND FUNCTIONAL ANNOTATION OF GENOMIC SEQUENCES:ASSIGNMENT OF FOLD FAMILY AND SORTING OF PROTEINS WITH RESPECT TO SUBCELLULAR LOCALIZATION.
    EISENHABER FRANK, BORK PEER, HUYNEN MARTIJN, ORENGO CHRISTINE, SCHULTZ JORG, SUNYAEV SHAMIL R., YUAN YANPING
• SVISCHEVA G.R.
  • SELECTIVE MODELS FOR MAPPING OF GENES IDENTIFIED IN RADIATION HYBRIDS.
    SVISCHEVA G.R.

T

• TABOLINA O.Yu.
  • SEQUENCE ALIGNMENT WITHOUT GAP PENALTIES.
    ROYTBERG M.A., SEMIONENKOV M.N., TABOLINA O.Yu.
• TAKAGI T.
  • A NEW CUT-OFF ESTIMATING ALGORITHM FOR TRANSCRIPTION FACTOR BINDABILITY ON DNA.
    TSUNODA T., TAKAGI T.
• TAKAKO TAKAI
  • DEVELOPMENT OF A RECEPTOR DATABASE.
    KOTOKO NAKATA, TAKAKO TAKAI, TSUGUCHIKA KAMINUMA
• TAKANORI WASHIO
  • ANALYSIS OF COMPLETED GENOMES SUGGESTS THAT HAIRPIN FORMATION IS NOT A UNIVERSAL MECHANISM FOR PROCARYOTIC TRANSCRIPTION TERMINATION.
    TAKANORI WASHIO, TOMITA MASARU
• TARANIN A.V.
  • SEARCHING FOR THE IMMUNOGLOBULIN SUPERFAMILY GENES IN C.ELEGANS.
    TARANIN A.V., ROGOZIN I.B.
• TATUSOV R.L.
  • A NATURAL TAXONOMY OF GENE FAMILIES FROM COMPLETE GENOMES.
    TATUSOV R.L., KOONIN E.V., LIPMAN D.J.
• TATUSOVA T.A.
  • GENOMES DATA IN ENTREZ: REPRESENTATION AND ANALYSIS.
    TATUSOVA T.A., OSTELL J.
• TAUSON E.L.
  • THE SEQUENCING AND MOLECULAR ANALYSIS OF COXI GENE FRAGMENTS OF WILD PERENNIAL CROP ELYMUS SIBIRICUS L..
    FALSHINA I.V., VERBITSKII D.S., ROGOZIN I.B., KONSTANTINOV Yu.M., TAUSON E.L.
• TCHURAEU R.N.
  • THE EQUATIONS OF DYNAMICS OF GENES ACTIVITIES IN A GENERAL VIEW.
    TCHURAEU R.N.
• THIEFFRY DENIS
  • FLOWER MORPHOGENESIS IN ARABIDOPSIS THALIANA: A LOGICAL ANALYSIS.
    MENDOZA LUIS, ALVAREZ-BUYLLA ELENA, THIEFFRY DENIS
• TITOV I.I.
  • PREDICTING RNA FOLDING BY GENETIC ALGORITHM WITH LOCAL EXHAUSTION.
    TITOV I.I., IVANISENKO V.A., KOLCHANOV N.A.
  • STATISTICAL MODEL OF DOUBLE HELIX GROWTH.
    TITOV I.I.
  • FUNCTIONAL RELATIONSHIP BETWEEN AMINO ACID RESIDUES AT N- AND C-TERMINI OF DNA-BINDING REGIONS OF TRANSCRIPTION FACTORS CREB AND AP-1 REVEALED BY ANALYZING THE PAIR CORRELATIONS OF AMINO ACID SUBSTITUTIONS.
    AFONNIKOV D., TITOV I.I.
• TOM SHIMIZU
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
• TOMITA MASARU
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    
  • ANALYSIS OF COMPLETED GENOMES SUGGESTS THAT HAIRPIN FORMATION IS NOT A UNIVERSAL MECHANISM FOR PROCARYOTIC TRANSCRIPTION TERMINATION.
    TAKANORI WASHIO, TOMITA MASARU
  • ON NEGATIVE SELECTION AGAINST ATG TRIPLETS NEAR START CODONS IN EUCARYOTIC AND PROCARYOTIC GENOMES.
    RINTARO SAITO, TOMITA MASARU
  • COMPUTER ANALYSIS OF BASE PAIRING FREE-ENERGY BETWEEN SHINE-DALGARNO SEQUENCE AND 16S RRNA SEQUENCE IN VARIOUS PROCARYOTES.
    OSADA YUKO, RINTARO SAITO, TOMITA MASARU
• TRIFONOV E.N.
  • HOW BASICS OF PROTEIN EVOLUTION COULD HELP THE GENE FINDING.
    TRIFONOV E.N.
• TSUGUCHIKA KAMINUMA
  • DEVELOPMENT OF A RECEPTOR DATABASE.
    KOTOKO NAKATA, TAKAKO TAKAI, TSUGUCHIKA KAMINUMA
  • A THREE-LAYER MODEL FOR DESCRIBING DEVELOPMENT OF C.ELEGANS.
    TSUGUCHIKA KAMINUMA, IGARASHI TAKAKO, NAKANO TATSUYA, SASAKI SHINYA, MIWA JOHJI
• TSUNODA T.
  • A NEW CUT-OFF ESTIMATING ALGORITHM FOR TRANSCRIPTION FACTOR BINDABILITY ON DNA.
    TSUNODA T., TAKAGI T.
• TULOKHONOV I.I
  • STRUCTURE-FUNCTIONAL HOMOLOGY OF THE PROKARYOTIC AND EUKARYOTIC RNA POLYMERASES.
    SAVINKOVA L.K., SOKOLENKO A.A., SEDOVA V.M., RAU V.A., TULOKHONOV I.I, KOBZEV V.F., ARSHINOVA T.V.
    

U

• ULYANOVA N.P.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
• UMRANIA Y.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
• URMILA KULKARNI-KALE
  • USE OF BIOINFORMATICS IN DEVELOPMENT OF PEPTIDE VACCINE.
    KOLASKAR A.S., URMILA KULKARNI-KALE, GORE M.M.
• UVAROV D.L.
  • INVARIANT SECONDARY STRUCTURE OF ALU REPEATS PREDETERMINES CLUSTERIZATION OF REGULATORY ELEMENTS IN HUMAN GENOME.
    BLINOV V.M., UVAROV D.L., RESENCHUK S.M., CHIRIKOVA G.B., KISSELEV L.L.

V

• VALUEV V.P.
  • ACTIVITY: A DATABASE FOR ACTIVITIES OF FUNCTIONAL DNA/RNA SITES.
    PONOMARENKO J.V., FURMAN D.P., MISHCHENKO T.M., KATOKHINA L.V., VALUEV V.P., PEREGOEDOVA E.L., FROLOV A.S., PODKOLODNY N.L., PONOMARENKO M.P.
  • AUTOMATIC GENERATION OF RECOGNITION PROGRAMS FOR AMINO ACID SEQUENCES.
    VALUEV V.P., KUROPATOV D.A., PONOMARENKO M.P.
• VAN HELDEN J.
  • ANALYSIS OF TRANSCRIPTIONAL FACTORS IN E. COLI.
    PEREZ-RUEDA E., VAN HELDEN J., WODAK S., COLLADO-VIDES J.
    
• VARDASANIDZE K.S.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• VASYUTINA E.L.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
  • INTERPRETATION OF X-RAY ANALYSIS DATA OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE HUMAN DNA TOPOISOMERASE I ON THE BASIS OF THE ENZYME.
    BUGREEV D.V., VASYUTINA E.L., BUNEVA V.N., NEVINSKY G.A.
• VERBITSKII D.S.
  • THE SEQUENCING AND MOLECULAR ANALYSIS OF COXI GENE FRAGMENTS OF WILD PERENNIAL CROP ELYMUS SIBIRICUS L..
    FALSHINA I.V., VERBITSKII D.S., ROGOZIN I.B., KONSTANTINOV Yu.M., TAUSON E.L.
• VINOGRADOV S.S.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
• VINOGRADOVA N.L.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
• VISHNEVSKY O.V.
  • SEARCH FOR DEGENERATE OLIGONUCLEOTIDE MOTIFS IN TRANSCRIPTION FACTOR BINDING SITES AND EUKARYOTIC PROMOTERS (THE SYSTEM ARGO).
    VISHNEVSKY O.V., PODKOLODNAYA O.A., BABENKO V.N.
    
• VITRESCHAK A.
  • CONSERVED RNA STRUCTURES REGULATE INITIATION OF TRANLSATION OF ESCERICHIA COLI AND HAEMOPHILUS INFLUENZAE RIBOSOMAL PROTEIN OPERONS.
    VITRESCHAK A., BANSAL A.K., GELFAND M.S.
• VOEVODA M.I.
  • NEW FUNCTIONS OF P53 GENE: REGULATORY AND HYPERSENSITIVE SITES IN EXONS OF MUTANT P53 MRNA FORMS.
    BLINOV V.M., RESENCHUK S.M., CHIRIKOVA G.B., PETROV N.A., PUZYREV A.A., ORESHKOVA S.F., KUVSHINOV V.N., ILYICHEV A.A., ROMASHCHENKO A.G., RUZANKINA Ya.S., MARTYNOV Yu.A., VINOGRADOV S.S., VOEVODA M.I., VARDASANIDZE K.S., KISSELEV L.L., MARTYNYUK R.A., SANDAKHCHIEV L.S., KARAKIN E.I.
  • RECONSTRUCTION OF THE GENOFOND PECULIARITIES OF THE ANCIENT PAZYRYK POPULATION (I-II MILLENIUM BC) FROM GORNY ALTAI ACCORDING TO THE MTDNA STRUCTURE.
    VOEVODA M.I., SITNIKOVA V.V., ROMASHCHENKO A.G., CHIKISHEVA T.A., POLOS’MAK N.V., MOLODIN V.I.
• VOROBIEV D.G.
  • SAMPLES AND ALIGNED: DATABASES FOR FUNCTIONAL SITE SEQUENCES.
    VOROBIEV D.G., PONOMARENKO J.V., PODKOLODNAYA O.A.
  • B-DNA-VIDEO: AN ACTIVE DATABASE FOR THE SIGNIFICANT B-DNA FEATURES OF TRANSCRIPTION FACTOR BINDING SITES.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., VOROBIEV D.G., LEVITSKY V.G., PODKOLODNAYA O.A., OVERTON G.C., KOLCHANOV N.A.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • A SYSTEM FOR ACTIVATION OF THE TRRD DATABASE: FURTHER DEVELOPMENT OF GENEEXPRESS.
    FROLOV A.S., LAVRYUSHEV S.V., VOROBIEV D.G., GRIGOROVICH D.A.
  • RECOGNITION ACCURACY OF DNA FUNCTIONAL SITES CAN BE INCREASED BY AVERAGING PARTIAL RECOGNITIONS.
    PONOMARENKO M.P., FROLOV A.S., PONOMARENKO J.V., PODKOLODNAYA O.A., VOROBIEV D.G., KOLCHANOV N.A., OVERTON G.C.
  • REVEALING THE CONFORMATIONAL AND PHYSICO-CHEMICAL DNA PROPERTIES APPLICABLE FOR PREDICTING THE ACTIVITY OF DNA FUNCTIONAL SITES.
    PONOMARENKO M.P., KOLCHANOV N.A., PONOMARENKO J.V., FROLOV A.S., PODKOLODNAYA O.A., VOROBIEV D.G., PODKOLODNY N.L., OVERTON G.C.
  • EUKARYOTIC MRNAS ENCODING ABUNDANT AND SCARCE PROTEINS ARE DISSIMILAR IN MANY STRUCTURAL FEATURES OF 5’-UNTRANSLATED LEADERS.
    KOCHETOV A.V., PONOMARENKO M.P., VOROBIEV D.G., FROLOV A.S., KISSELEV L.L., KOLCHANOV N.A.
  • THE STRUCTURAL ANALYSIS OF THE DNA FRAGMENTS ASSOCIATED WITH THE NUCLEAR LAMINS IN DROSOPHILA MELANOGASTER.
    LIKHACHEVA E., PONOMARENKO M.P., BOGACHEV S., KOKOZA E., FISHER P., PONOMARENKO J.V., VOROBIEV D.G., KOLESOV G.B., KOLCHANOV N.A.
  • SIGNIFICANT B-DNA CONFORMATIONAL AND PHYSICO-CHEMICAL PROPERTIES OF THE DNA TOPOISOMERASE I SITES.
    PONOMARENKO M.P., VOROBIEV D.G., PONOMARENKO J.V., KUZIN F.E., GRUZDEV A.D., KOLCHANOV N.A.
• VTYURIN N.
  • PROTEIN 3D ALIGNMENT SOFTWARE FOR INTEL COMPUTERS.
    VTYURIN N., BATURIN V., GULIN V., GORYACHEV N.
• VYSOTSKII V.I.
  • SOME PECULIARITIES OF LONG-RANGE INTERACTION BETWEEN NUCLEOTIDES IN THE INTRACELLULAR LIQUIDS.
    PINCHUK A.O., VYSOTSKII V.I.

W

• WARNER S.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
• WILLIAMS G.
  • CHARACTERIZATION OF THE COMPACT MODEL GENOME OF THE JAPANESE PUFFER FISH (FUGU RUBRIPES) USING A COSMID SEQUENCE SCANNING APPROACH.
    ELGAR G., CLARK M.S., EDWARDS Y.J.K., MEEK S., SMITH S., UMRANIA Y., WARNER S., WILLIAMS G., BISHOP M.J.
    
• WINGENDER E.
  • COMPEL: A DATABASE ON COMPOSITE REGULATORY ELEMENTS.
    KEL-MARGOULIS O.V., KEL A.E., FRISCH M., ROMASHCHENKO A.G., KOLCHANOV N.A., WINGENDER E.
  • GENEEXPRESS SYSTEM: DESCRIPTION, ANALYSIS, AND RECOGNITION OF REGULATORY SEQUENCES IN EUKARYOTIC GENOMES.
    KOLCHANOV N.A., PONOMARENKO M.P., KONDRAKHIN Y.V., FROLOV A.S., KOLPAKOV F.A., KEL A.E., KEL-MARGOULIS O.V., ANANKO E.A., IGNATIEVA E.V., PODKOLODNAYA O.A., STEPANENKO I.L., MERKULOVA T.I., BABENKO V.N., VOROBIEV D.G., LAVRYUSHEV S.V., GRIGOROVICH D.A., PONOMARENKO J.V., KOCHETOV A.V., KOLESOV G.B., PODKOLODNY N.L., WINGENDER E., HAINEMEIER T., MILANESI L., SOLOVYEV V.V., OVERTON G.C.
  • COMBINATORIAL IDENTIFICATION OF PROMOTERS INDUCED UPON IMMUNE CELL ACTIVATION.
    KEL A.E., KEL-MARGOULIS O.V., BABENKO V.N., WINGENDER E.
  • STATISTICAL RELATION BETWEEN THE POSITIONS OF THE ALPHA-HELIX IN THE ZINC-FINGER DNA-BINDING DOMAIN: RESULTS FROM THE PHAGE DISPLAY DATA ANALYSIS.
    AFONNIKOV D., WINGENDER E.
• WODAK S.
  • ANALYSIS OF TRANSCRIPTIONAL FACTORS IN E. COLI.
    PEREZ-RUEDA E., VAN HELDEN J., WODAK S., COLLADO-VIDES J.
    

Y

• YUAN YANPING
  • STRUCTURAL AND FUNCTIONAL ANNOTATION OF GENOMIC SEQUENCES:ASSIGNMENT OF FOLD FAMILY AND SORTING OF PROTEINS WITH RESPECT TO SUBCELLULAR LOCALIZATION.
    EISENHABER FRANK, BORK PEER, HUYNEN MARTIJN, ORENGO CHRISTINE, SCHULTZ JORG, SUNYAEV SHAMIL R., YUAN YANPING
• YURI MATSUZAKI
  • A VIRTUAL CELL WITH 127 GENES.
    TOMITA MASARU, KENTA HASHIMOTO, KOUICHI TAKAHASHI, TOM SHIMIZU, YURI MATSUZAKI, FUMIHIKO MIYOSHI, KANAKO SAITO, SAKURA TANIDA, KATSUYUKI YUGI, J. CRAIG VENTER, CLYDE A. HUTCHISON
    

Z

• ZAKHAROV I.A.
  • GENOME HOMOLOGY AND CHROMOSOMAL PHYLOGENETICS-COMPARATIVE COMPUTER ANALYSIS.
    ZAKHAROV I.A.
• ZAKHAROVA O.D.
  • THE BASIC PRINCIPLES OF DNA RECOGNITION BY SEQUENCE DEPENDENT AND INDEPENDENT ENZYMES.
    NEVINSKY G.A., VINOGRADOVA N.L., BUGREEV D.V., ISHENKO A.A., VASYUTINA E.L., ULYANOVA N.P., ZAKHAROVA O.D., KOLOCHEVA T.A.
• ZHANG MICHAEL Q.
  • A PROMOTER DATABASE OF YEAST SACCHAROMYCES CEREVISIAE (SCPD).
    JIAN ZHU, ZHANG MICHAEL Q.